Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi400g00039 ATGAGTACATCATGTAGTAAAAGACATGAATTTGAGGAATTTCACAAAGGTCTGCTCACAAAAGATGGAGATGAAAAGAATAAGCTTTCTACTCGACATTTCAGCCATGGATGTTACTTGGTTCAAGGAAAGATGGACCATGGAATGGAAGACTATGTTTTTGCTCAACACAAGAAGCTTAATGGTTATGACTTAGGACTGTATGCAATATTTGATGGTCACTCAGGTCGTGATGTAGCAAAATACTTGCAAAGCCATCTATTTGAAAACATACTAAGTGAGCCTGATTTCTGGAGAAATCCAGTGCATGCAGTTAAGAAAGCATGTAAAGCTACAGATGATGAGATTTTAGAAAGCATAGCTGATTCACATGGAGGATCAACAGCTGTTGCAGCAATACTAATTAATGGAGTAAAACTAGTGGTAGTCAATGTTGGTGATTCTAGAGCAATATCATGTAAAAATGGTCTAGCAAAACAAATTACTGTGGATCATGATCCAGAGAAGGAGAAAGATCTTGTTGAGAGCAGAGGAGGTTTTGTGTCCAAGAAACCTGGGAGTGTTCCAAGAGTAGATGGCCAATTAGCAATGACAAGAGCATTTGGAGATGGAAAACTTAAGGAGCACATTACTGCAGAACCAGATGTGATGATTCAGAAGATTGGTGAGGACACTGAATTCATCATTTTGGCAAGTGATGGTCTGTGGAAGGTATGA 717 0.3877 MSTSCSKRHEFEEFHKGLLTKDGDEKNKLSTRHFSHGCYLVQGKMDHGMEDYVFAQHKKLNGYDLGLYAIFDGHSGRDVAKYLQSHLFENILSEPDFWRNPVHAVKKACKATDDEILESIADSHGGSTAVAAILINGVKLVVVNVGDSRAISCKNGLAKQITVDHDPEKEKDLVESRGGFVSKKPGSVPRVDGQLAMTRAFGDGKLKEHITAEPDVMIQKIGEDTEFIILASDGLWKV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi400g00039 238 ProSiteProfiles PPM-type phosphatase domain profile. 35 238 IPR001932 -
Sebi400g00039 238 PANTHER PROTEIN PHOSPHATASE 26 238 IPR015655 GO:0004722|GO:0006470
Sebi400g00039 238 Pfam Protein phosphatase 2C 47 238 IPR001932 -
Sebi400g00039 238 SUPERFAMILY PP2C-like 31 238 IPR036457 -
Sebi400g00039 238 Gene3D - 25 238 IPR036457 -
Sebi400g00039 238 SMART PP2C_4 28 238 IPR001932 -
Sebi400g00039 238 CDD PP2Cc 34 238 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi400g00039 Sebi-Chr400 501663 502823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi400g00039 28 238 PP2C-type Phosphatase Gene Family AT2G34740 65.566 1.51e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi400g00039 - - gmx:100814772 400.979