Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi400g00038 ATGGATTCAGTAGCTTCTGGGTTGTTGGCCACTATGTTGGACAGGCTAGCAACCACTGCTTTTAGGAACATTTCCATGGCAAGGGGTCTCCAAGTTGATGTGGGCACCCTCCAAGAATCTCTCACAGTCATCGGTGCCTTCATTATGGATGCTGAGAACAAGCAAACCCAAAGCCAATCCATATTGCTCTGGCTGCAACAACTCAAAGAAGCTTTCTTTGATGCCAGTGACATCTTGGATGAGATTGAGTGTGAGGCTCTCAGGAATCAAGTTGTGAACAGACATGGAGGCTTCACCACAAAGGTACAACGTTTTCTCTCATCTTCTAACCCTTTTGTATTTCGTCTTAAGATGGCCCACAAGATCAAGGACATCAAGGACAGGATAGATGAAATAACTACTCTTAGGATGAAATTGGGTCTCTCAGTGATCCATGAAAGTAGTCCTAGTGTGTCACTCCATCAGAACATGGCTTGGAGAGAGACCCATTCTTATGTTAGGCCTTCCCTTGTGATTGGTAGAGATGAGGAGAAAGAAAAGATCATTGGGTCTTTGATGGTTCCACCATCTGATGATGATGGAATTGATGTTATTCCTATTGTTGGAATTGGAGGATTGGGGAAGACCACACTTACCCAATTAGTGTACAATGATGAAAGGGTCATTGAGCATTTTAATTTGCGTATGTGGGTGTTTGTTTCTGATGATTTTGATGTTAAGAGGCTAGTACTAGAGATTATTAAAGCTATGCAAGGAACAGATGTAGTAGATGCTCACAACAAAAGTTTTGATCAATTACAAAATCTACTTCGTGAGGGATTATGTGGGAGAAAATTTCTACTTGTTCTAGATGACGTCTGGAATGAAGATTATAGAGAATGGCTTCAATTGAAAAATCTTTTAATAGGTACTCAAGATAAAGATAACAAATTTGGTAACAAGATTATCACAACCACTCGTAGTGACAAGGTTGTTTCAATAATGGGGAATGTTTATAAACACAACTTGAAATATCTCCCTGAAGAAGATTGTTTAAAGCTATTTGTTAAGTGTGCATTTCCAGCAGGAGAGGAGAAAAAACACCCAAGGCTTTTAGAAATTGGGAAGGATATTGCTAGAAAGTGCCAAGGGTTGCCCTTGGCAGTGGTAAGTTTAGGGTACCTGCTTTACTCAAAACCTGGAGAAAATGAGTGGAAGAAAATAAGAGATAGTGAAATTTGGAAGATGAACCAACAAGATGATGGCATTTTGGCTGCATTGAAACTAAGCTATAATCACTTGCCATCTAGATTGAAACAGTGTTTCTCTTATTGTTCAATATTTCCTAAGGGTTATCACTATACTAATCTAGAGCTGATTTCATTTTGGATGGCACATGGACTACTACAAACCAAAGATGAAGATGAAGAGCCGGAAGAACTTGGGGAGATTTATATTAAGGAGTTGGTGTCAAGATCTTTCTTTGAAGCTGTCCCTGAAAATCTAGTAGTTATTGATGGTCTTATTTTTGAAGAACTTGAGCTTCTTGGCATCTCTTTTTTCAAAATGCATGATCTTGTTCATGACCTTGCTGTGTCCACAATGCCAAATGAAAGGGCAGTAGTAAAATTTAATTCAACATATGTTAAAGAAAAGGTGCAACATATATCATTTTCAGACAGTGGTGAAGGAGTTCCTACTTTTGGTAAAGTATTGAATAAGGTTCGAACCATTGGATTCTGGCATGTAGGTCAAAAAGCATATGCAATTACTGAGCCATTTGTCAGATGGTTCTCCAAGGAATTCAAGTACCTCAGGGTGTTGAATATACAAGGTTCAAATTTTCAGTATTTGCCAGATTGTTTCAACAAAATGAAGCATTTGAGGTATCTTGATCTAAGCTATTGCCAGAGGATGAAAAAACTCCCAGATTCCATATGCAAGCTCCAAAGCCTAGAGGTTTTAAATCTCTGTAGATGTGTAGCACTCAAACATATTCCCAAAAAATTTAGGAATCTTGCCAGCCTTCGGATTTTGTGGATTACCACACAAGACACAGATTTGTCTTATATAGGTATTGGGAGCTTGAAATATCTACAAACTTTAATTTTGTGGAATTGTGAATATTTGGTTTTTCTTCCACGTGATTTGAGGCACTTGACTGCTTTAAAGAGGCTGACTATTGAGTCTTGTGATGAGGTGATTAGTTTTGAGGATGAAGGAGAAGAAGAAAATGGAAACTACTCCTTGAAACTCGAACGATTTTCAATTGACAAATTACCCAATTTGGCAGCATTACCAGGTTGGCTTAGAAGATCTGGTAAAACTTTGAGATACATGGGTCTTTCAGAATGTCCAAGCTTAACAGCATTGCCAGAATGGTTGCCAAACCTAACATCACTTGAGACTCTTCTCATTGGTGATTGTCCAAACTTGACACTACCCCAGCGTATGGATCTTCTTCAAAGCCTTCAGAACTTGAAGATATATGGATGTCCTCAGCTAGTTGAGAGATGCAAACGATATACAGGCCTTGACTGGCCCAAAATAGCTCATATCCCAAATGTTGATCTGAATGCTGTTTTCAATGGAGTTCATTCATTGTTTAGGCGCAAACCAATTTGGATGTTAGAGTTCACTATTGACAACTTTGAAATATATGCTGAATTTAGGTGCAATCCTTAA 2664 0.3859 MDSVASGLLATMLDRLATTAFRNISMARGLQVDVGTLQESLTVIGAFIMDAENKQTQSQSILLWLQQLKEAFFDASDILDEIECEALRNQVVNRHGGFTTKVQRFLSSSNPFVFRLKMAHKIKDIKDRIDEITTLRMKLGLSVIHESSPSVSLHQNMAWRETHSYVRPSLVIGRDEEKEKIIGSLMVPPSDDDGIDVIPIVGIGGLGKTTLTQLVYNDERVIEHFNLRMWVFVSDDFDVKRLVLEIIKAMQGTDVVDAHNKSFDQLQNLLREGLCGRKFLLVLDDVWNEDYREWLQLKNLLIGTQDKDNKFGNKIITTTRSDKVVSIMGNVYKHNLKYLPEEDCLKLFVKCAFPAGEEKKHPRLLEIGKDIARKCQGLPLAVVSLGYLLYSKPGENEWKKIRDSEIWKMNQQDDGILAALKLSYNHLPSRLKQCFSYCSIFPKGYHYTNLELISFWMAHGLLQTKDEDEEPEELGEIYIKELVSRSFFEAVPENLVVIDGLIFEELELLGISFFKMHDLVHDLAVSTMPNERAVVKFNSTYVKEKVQHISFSDSGEGVPTFGKVLNKVRTIGFWHVGQKAYAITEPFVRWFSKEFKYLRVLNIQGSNFQYLPDCFNKMKHLRYLDLSYCQRMKKLPDSICKLQSLEVLNLCRCVALKHIPKKFRNLASLRILWITTQDTDLSYIGIGSLKYLQTLILWNCEYLVFLPRDLRHLTALKRLTIESCDEVISFEDEGEEENGNYSLKLERFSIDKLPNLAALPGWLRRSGKTLRYMGLSECPSLTALPEWLPNLTSLETLLIGDCPNLTLPQRMDLLQSLQNLKIYGCPQLVERCKRYTGLDWPKIAHIPNVDLNAVFNGVHSLFRRKPIWMLEFTIDNFEIYAEFRCNP 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi400g00038 887 Gene3D - 9 123 - -
Sebi400g00038 887 Gene3D - 338 428 IPR042197 -
Sebi400g00038 887 Pfam NB-ARC domain 175 425 IPR002182 GO:0043531
Sebi400g00038 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 438 IPR027417 -
Sebi400g00038 887 FunFam Probable disease resistance protein At1g63360 424 526 - -
Sebi400g00038 887 Pfam Rx N-terminal domain 9 96 IPR041118 -
Sebi400g00038 887 SUPERFAMILY L domain-like 515 848 - -
Sebi400g00038 887 PRINTS Disease resistance protein signature 375 389 - -
Sebi400g00038 887 PRINTS Disease resistance protein signature 616 632 - -
Sebi400g00038 887 PRINTS Disease resistance protein signature 197 212 - -
Sebi400g00038 887 PRINTS Disease resistance protein signature 273 287 - -
Sebi400g00038 887 PANTHER DISEASE RESISTANCE PROTEIN RP 59 822 IPR044974 GO:0006952
Sebi400g00038 887 FunFam Probable disease resistance protein At1g61300 153 333 - -
Sebi400g00038 887 Gene3D Ribonuclease Inhibitor 582 766 IPR032675 -
Sebi400g00038 887 Gene3D Ribonuclease Inhibitor 767 836 IPR032675 -
Sebi400g00038 887 Gene3D - 156 333 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi400g00038 Sebi-Chr400 492956 495701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi400g00038 195 828 WRKY Transcription Factor Family AT5G45050 22.886 5.51e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi400g00038 - - mtr:25493373 1255.74