Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi400g00029 ATGGTGGTTATTGGTCCACCTGTGATGGAAACAACTTTGGCAGAAGACGATGACAGAAGCCAAGGCTTGGGGCTAGCCTCAGCAGCAGGTCCGGGCGACGTGGTTGGATGTCGTCCACATGGCAGGACGCCGGGATCAAAGAACAAGCCAAAGCCATCGGTGAATATAATGAGAGAGCACGCAAACACTCTAAGGGCTCATATTCTCGAAGTCGGAAGTCACTCTGACGTTTTCGAATGCGTAACTACCTACGCGTGGCGTCACCAGGAAATTACGTCTATTGTGCGAGATGGTACATATAGGACCGGTGATCTTGATCGCGACTTTCCTTTTTCTGGACTTCCGAGATTCAATTCGTCGTTGAATCATATGCAGAATGAACAGATGCTGGGTAAAGAGAGGGACGCGTGTCACGTTGAGAGAAATCACTCGCAGGTTTTGGTTGCATGTTACCCCCGGAAAATGAACAGTGTGCCGAAAGTGACGTGGAAAACTTCCAATCTTGCAGTGCTTCGTCTTTGGTTCCCTTTCCCTTCATGA 540 0.4926 MVVIGPPVMETTLAEDDDRSQGLGLASAAGPGDVVGCRPHGRTPGSKNKPKPSVNIMREHANTLRAHILEVGSHSDVFECVTTYAWRHQEITSIVRDGTYRTGDLDRDFPFSGLPRFNSSLNHMQNEQMLGKERDACHVERNHSQVLVACYPRKMNSVPKVTWKTSNLAVLRLWFPFPS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi400g00029 179 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 90 IPR014476 GO:0003680
Sebi400g00029 179 MobiDBLite consensus disorder prediction 15 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi400g00029 Sebi-Chr400 386672 387296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi400g00029 38 89 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 73.077 2.67e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi400g00029 - - pvu:PHAVU_003G230600g 115.161