Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi400g00015 ATGGTCTCATCCCCTGCAGCATCCAATAACCCCAACATGTCCAATGAGAATTTTGTGATGAGGGAATTGATAGGGAAATTAGGAGCTGTTGGAAACTCTGATGAGTTCTCACCACATTCTCAGCCTTTGGTTGTTGCATCTTCTTACATGAATGGTGGGAATAACAGCACCAACACTTCATGTTACAGCACTCCTTTGAGTTCTCCTCCAAAGCTCAACATTGCCCCAATGATGAACCATTTGGTGAAAGAGAATTTGCCTAAACCAATGGCTCTCAATTCCAGTGTGGCAGAATTCTCAGCTGATCCTGGTTTTGCTGAGAGGGCTGCAAAGTTTTCTTGCTTTGGGAGCAGGAGTTTTAATGATCGGAGTAGCCAATTGGTTGTGAACAATGGTGAATTAGCTAAGAGATCTGCACCAGTAATGGAAAATGGGAAGCTACTAACAAGAGTCTCAAGTAGTCCATCACTCAAGACATTTGAATCTCAAATGGAGAACAAGAATAGTCCATTACAGGATCAGGATAGAATGGAAGTGGCCAATTCTCAAGAGGAATCTACAATCTCTGAGCAAACCCCAAATGGGGAAAAGATTACATTCATGTTAGAGCAAGAAGAGGCCAAGCTACTGACAGCTATAGTCTTGCAGAACGTGAGGGAGAAAATCAGTGAGAGGATGAAGCTTCTCCAAGATCTTGTACCAGGTTGCAATAAGGTCACTGGTAAGGCACTTATGCTTGATGAAATTATAAATTATGTTCAGTCATTGTAG 771 0.4215 MVSSPAASNNPNMSNENFVMRELIGKLGAVGNSDEFSPHSQPLVVASSYMNGGNNSTNTSCYSTPLSSPPKLNIAPMMNHLVKENLPKPMALNSSVAEFSADPGFAERAAKFSCFGSRSFNDRSSQLVVNNGELAKRSAPVMENGKLLTRVSSSPSLKTFESQMENKNSPLQDQDRMEVANSQEESTISEQTPNGEKITFMLEQEEAKLLTAIVLQNVREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi400g00015 256 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 219 256 IPR024097 GO:0006355
Sebi400g00015 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 206 256 IPR011598 GO:0046983
Sebi400g00015 256 Gene3D - 213 256 IPR036638 GO:0046983
Sebi400g00015 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 219 256 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi400g00015 Sebi-Chr400 151568 152546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi400g00015 1 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 40.830 3.48e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi400g00015 - - gmx:100787699 257.299