Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi400g00011 ATGTGCTCAATGCCCATTGGCTATAATCGATGCCGAGCTGTGGAGAAGGTGCTAGAATGTATTAAAATATCATGCCTGAATGCAAAATATGGCTGTAAAGAGATGTTTAGTTACAGTGTGAAAAGTGACCATGAGGAGGATTGCATCTACATACCATGTTTATGCCCAGATACAGGTTGCAGCTTTGTTGCCTCATCCAAGGAGTTATCTCTCCACTTCAGCCATAGACATGTAGGTTCTGGAATACAGTTTACATATGATAGATTTTTCACTGTCTTCTTAAACACTGACCAAAAAGCTGTTGTTCTTCAAGAGAAAAATGATGCTAATCTGTTTATTGTTCAAAACAACCGTGAGAGTCTGGGAAATATAGTCCATATCAGTTGCATTGGCCCCAAATCGATGGCAGGGTTTCATTATGATGTCTTGGGAAGGTCTCGGGGAAGCACTCTAATATTGCAATCTGTTACCAGGATCATTCAAAGCATTGGTCGGACTCCTTCAACAGGGTTCCTTTTGATTCCATCTGACTTTTTTGGTTCTGGACAACTCATACTGGATATTCGCATAAAGTTACAACATTAA 585 0.4 MCSMPIGYNRCRAVEKVLECIKISCLNAKYGCKEMFSYSVKSDHEEDCIYIPCLCPDTGCSFVASSKELSLHFSHRHVGSGIQFTYDRFFTVFLNTDQKAVVLQEKNDANLFIVQNNRESLGNIVHISCIGPKSMAGFHYDVLGRSRGSTLILQSVTRIIQSIGRTPSTGFLLIPSDFFGSGQLILDIRIKLQH 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi400g00011 194 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 2 191 IPR044286 -
Sebi400g00011 194 Pfam Seven in absentia protein family 10 158 IPR018121 GO:0005737|GO:0006511|GO:0007275
Sebi400g00011 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 73 IPR013083 -
Sebi400g00011 194 SUPERFAMILY TRAF domain-like 21 190 - -
Sebi400g00011 194 ProSiteProfiles Zinc finger SIAH-type profile. 20 78 IPR013010 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi400g00011 2 77 C3H Transcription Factor Family AT2G41980 33.333 7.17e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi400g00011 K04506 - gmx:100778869 285.034