Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi400g00001 ATGTGCAACATCTTTGGCCCAATTATGAACAACTATCAAGGTGATTTAACTGACATAATCCGTGCATCTTATGGCAGCTTCAACACAGGCACTGAAGCTGCTCCCTTCTTTTGTGTCTCTTCTGATCCCATGAATTTCTCTTCTGTTTTGGAGGAAGACCCTAGTTGCAGCTTTGGTGATCCATTCTCTAACATGAGAGACCCCTTTCTACATGAGCTTGATATGCTGCCTAATGCCTCTGCCTACTTTAACAGTACTTCTGGGGGATTGATGAAAGAAGCAGCTTGTTTTGGCGGTGTTTTGTCACAAAAGAACATTCTAGAGGATGATATGAGAAGGCCTTGTAACAGCATAATCATGTCAAACATGACTCAGATCTCTCCCAATTCTAAGTTACCAATCTCACCAGCTGATTCAAAGCCTTCAACTGGTAAGATGAATATTATTGCAAAGACCTCTAAAGACCATTGCTTCGTGGACAACACAGGAGTAGTTCAGCAGATCTCAACTCCACGAAATCCGGGTCTTAAGCGAAGGAAGATCCTGGCAAAGAAGTCAATTTGTATTCCTGCACCAGCAGCTCCAAACAGCAGACAAAGTGGAGAGGTAGTTCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCTATTAAAGGTTCTCTGTATCCAAGGAGTTATTATAGATGCAGCAGCTCAAAGGGTTGTCCAGCCAGGAAACAAGTTGAAAGGAGCAGAACAGATCCAAACATGTTAGTCATAACTTACTCTTCAGAGCATAACCATCCATGGCCAACTCAGAGAAATGCTCTGGCTGGTACAGCTCGATCCCAATCATCCAAGAATAATATTGTTGCTGCTTCAAAGAATTCATCAGAAACCACTCAACCCCAAAATGGCACAACAAAGCCAGATGAGGAGCAGCAAGAGAGCAATAGTGACAGCAATGCGTCCCCAGTAGTTGCAGGGAACCCAGTAAACAGTACTGCATCTGTAAAGGGAGAGATTGGAATGGATGATGGGGAATTCAGTAATATAATGGACTTATCCCTTACAAACCATCTAATCTGA 1074 0.4302 MCNIFGPIMNNYQGDLTDIIRASYGSFNTGTEAAPFFCVSSDPMNFSSVLEEDPSCSFGDPFSNMRDPFLHELDMLPNASAYFNSTSGGLMKEAACFGGVLSQKNILEDDMRRPCNSIIMSNMTQISPNSKLPISPADSKPSTGKMNIIAKTSKDHCFVDNTGVVQQISTPRNPGLKRRKILAKKSICIPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSLYPRSYYRCSSSKGCPARKQVERSRTDPNMLVITYSSEHNHPWPTQRNALAGTARSQSSKNNIVAASKNSSETTQPQNGTTKPDEEQQESNSDSNASPVVAGNPVNSTASVKGEIGMDDGEFSNIMDLSLTNHLI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi400g00001 357 MobiDBLite consensus disorder prediction 287 343 - -
Sebi400g00001 357 MobiDBLite consensus disorder prediction 287 332 - -
Sebi400g00001 357 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 321 IPR044810 GO:0003700
Sebi400g00001 357 SMART WRKY_cls 205 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi400g00001 357 FunFam probable WRKY transcription factor 14 179 259 - -
Sebi400g00001 357 ProSiteProfiles WRKY domain profile. 200 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi400g00001 357 SUPERFAMILY WRKY DNA-binding domain 203 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi400g00001 357 Gene3D WRKY domain 194 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi400g00001 357 Pfam WRKY DNA -binding domain 207 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi400g00001 Sebi-Chr400 460 3793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi400g00001 1 274 WRKY Transcription Factor Family AT1G30650 50.859 1.05e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi400g00001 WRKY 5.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi400g00001 - - gmx:102669548 421.779