Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00271 ATGTCTCCGATGAGGAGATCAGGAAAGAGGTCGAAGCTCTTCATCCTCATGATTCACACGTTGTTCTTCATACCCGTGGTGTCTAGAGGATTAAGGGCATCATATAGGTACCTATATCTTACCTTACTTCTCTTCTCTTCTCTACCTTACATATCCAAATCCAATTTAATTGCATTGCAGGTGTCAAGATCTATTGGTGATGTGTATCTCAAGAGACCTAACTTTTACAGAGACCCGGTTTTTCAGCAATTTGGAAATCCCATTCCTTTGACTCGTCCTGTAATGACAGCTGAACCTTCCATCACTGTTAGGGAGCTTCAACCGGAAGATCTGTTCATCATATTTGCATCCGACGGACTTTGGGAACAATTAACTGATCAAGAAGCGGTTGACATTGTTTTCAAATATCCCAGAGCT 417 0.4173 MSPMRRSGKRSKLFILMIHTLFFIPVVSRGLRASYRYLYLTLLLFSSLPYISKSNLIALQVSRSIGDVYLKRPNFYRDPVFQQFGNPIPLTRPVMTAEPSITVRELQPEDLFIIFASDGLWEQLTDQEAVDIVFKYPRA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00271 139 Gene3D - 52 139 IPR036457 -
Sebi3g00271 139 ProSiteProfiles PPM-type phosphatase domain profile. 1 139 IPR001932 -
Sebi3g00271 139 PANTHER PROTEIN PHOSPHATASE 59 137 IPR015655 GO:0004722|GO:0006470
Sebi3g00271 139 Pfam Protein phosphatase 2C 58 133 IPR001932 -
Sebi3g00271 139 SUPERFAMILY PP2C-like 58 135 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00271 Sebi-Chr3 4287550 4287966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00271 59 138 PP2C-type Phosphatase Gene Family AT4G33920 73.750 7.27e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00271 - K01102 gmx:100812137 142.895