Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00252 ATGGATGGTATGAATATGATGATGAAGGAAAAAGGGAATAAGAAAGGGCTTATCACCAAAACATGGGAGCGATGCAAGTCGATAGGATCATCAAAGTCGTCAAAGAGGAGCAAATCGTGGCCAAGGCGAGGCAAGAAGAAGAATAAGAGTACTAGTAGTGTAGTGGCCCCTGAAGGTTGCTTCTCTGTGTATGTTGGGCCTCAAATGCAAAGGTTTGTGATAAAAGCAGAGTATGCTAACCACCCTTTGTTCAAGATGTTGCTTGAAGAAGCAGAGTCAGAATACGGTTATAACAGCCAAGGCCCTTTAGCCCTTCCTTGTAACGTTGATATGTTTTACAAGGTGTTGATGGAAATGGATGAAGAACAAGATCAGGAGTACATTACTACTACTACCACTAATCCTCATCAAGGCTGTACTAGTGTTTTATTTGGGAAACGTTCTCGCAGCTCTTATCATCTTCTTAGCCCTTCGCGAATGCTTCTCATAAACAACTTCTGA 501 0.4212 MDGMNMMMKEKGNKKGLITKTWERCKSIGSSKSSKRSKSWPRRGKKKNKSTSSVVAPEGCFSVYVGPQMQRFVIKAEYANHPLFKMLLEEAESEYGYNSQGPLALPCNVDMFYKVLMEMDEEQDQEYITTTTTNPHQGCTSVLFGKRSRSSYHLLSPSRMLLINNF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00252 166 MobiDBLite consensus disorder prediction 7 21 - -
Sebi3g00252 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 116 IPR003676 GO:0009733
Sebi3g00252 166 Pfam Auxin responsive protein 30 116 IPR003676 GO:0009733
Sebi3g00252 166 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00252 Sebi-Chr3 3949928 3950428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00252 56 116 Calmodulin-binding Proteins AT3G43120 47.541 1.74e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00252 K14488 - gmx:100777217 188.348