Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00220 ATGGCAGCAGCACCAGATTCTACTCGCGAGGAGAATGTTTACATGGCGAAGTTGGCGGAGCAGGCTGAGCGGTACGAGGAGATGGTTGAGTTCATGGAGAAGGTTGCCAAGACAGTGGATGTTGAGGAGTTGACCGTGGAGGAGAGGAATCTCCTCTCTGTGGCTTACAAGAATGTGATTGGTGCTAGGAGGGCTTCCTGGAGGATCATTTCCTCCATTGAACAGAAGGAGGAGAGTAGAGGCAATGAGGACCATGTGGCTATAATAAAGGATTACAGGGGAAAGATTGAGACTGAGCTCAGCAAGATCTGTGATGGGATTTTGAGCCTCCTTGAGTCCAATCTTATCCCATCTGCTGCATCCCCTGAGTCTAAAGTGTTTTACCTTAAAATGAAGGGTGACTACCACAGGTACCTTGCTGAGTTTAAGACCGGGGCAGAGAGAAAAGAAGCTGCCGAGAGTACCTTGTTAGCTTACAAGTCGGCTCAGGATATTGCACTTGCTGACCTGGCCCCCACCCACCCTATAAGGCTGGGTCTTGCACTCAACTTTCTGTGTTCTATTATGAAATCCTTAACTCACCAGATCGTGCTTGTAATCTCGCGAAGCAGGTATCCTTCCTTGCTATATGATATAAAGGCATTTGATGAGGCAATATCCGAGCTTGACACGTTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAGCTTCTCCGAGACAATCTGACTTTGTGGACATCTGACATCACGGATGATGCTGGAGATGAGATCAAAGAAACATCTAAGCAACAATCAGGCGATGGGCAGCAGTGA 819 0.4774 MAAAPDSTREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRGKIETELSKICDGILSLLESNLIPSAASPESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFLCSIMKSLTHQIVLVISRSRYPSLLYDIKAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKETSKQQSGDGQQ 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00220 272 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
Sebi3g00220 272 Coils Coil 15 35 - -
Sebi3g00220 272 Gene3D - 1 261 IPR036815 -
Sebi3g00220 272 SMART 1433_4 9 261 IPR023410 -
Sebi3g00220 272 SUPERFAMILY 14-3-3 protein 8 250 IPR036815 -
Sebi3g00220 272 PIRSF 14-3-3 4 260 IPR000308 -
Sebi3g00220 272 PANTHER 14-3-3 PROTEIN 9 252 IPR000308 -
Sebi3g00220 272 ProSitePatterns 14-3-3 proteins signature 2. 230 249 IPR023409 -
Sebi3g00220 272 Pfam 14-3-3 protein 15 248 IPR023410 -
Sebi3g00220 272 PRINTS 14-3-3 protein zeta signature 221 250 IPR000308 -
Sebi3g00220 272 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Sebi3g00220 272 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Sebi3g00220 272 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00220 Sebi-Chr3 3229403 3231781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00220 7 271 14-3-3 family AT3G02520 81.203 2.53e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00220 K06630 - gmx:547657 432.95