Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00219 ATGGAAGGCAATAATAGAGAAGAGATTGTGGATGTTGGATCAGTTGTAGAAGCTGTTTCTGCTGACGACGGTGACGCCCCTCTTTACAACCTCGAAAGCCTCTGCATGCGTTGTGGTCAAAACGGGATTACAAGATTTTTATTGACTTTAATTCCTCACTTTAGGAAGATTTTGTTGTCAGCTTTTGAATGTTCTCACTGTGGTGAGAGAAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCACGTGGTTGTTGTTACTCTCTGGAGATCCCATCAGGTGAACAAAAGATGCTCAATCGACAAGTGGTTAAATCAGAATCTGCTACCATTAAGATACCTGAACTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGGATACTAATGCGGGCTGCTGATGAACTTCAGGCCCTTCAAGAAGAACGCAGAAAAGTGGCTCCAGAGACTGCTGAAGCAATTGATCAGTTCTTGGTCAAATTGCGAGCCTGTGCAACAGGGGAATCGTCCTTCATGTTTATTCTTGATGATCCCGCAGGAAACAGCTTCATTGAAAACCAGTTCGCACCGTCATCTGATCCATACCTGACTATCAAGTTTTATGAGCGAACTCCTGAGCAGCAAACATCATTGGGATATCTTGTTGATTCTACACAAATTGAAGGAACTACTGATGAAGTACCAGAAGGGGGAGAAGCTGTGGCTGCTAATCAAATGAGGGGAGAACCACATGGGTCAGTAGGGGCAGCAGCTGGTCATCAAGCCATTGCACAGAGTAATAGTGCAGAAATTGCAGAAGCCTTGTTTCGATATACTGCACCAGAAGAGGTGATGACTTTCCCATCAACTTGTGGTGGTTGTGCCAGTCCGTGCGAAACTCGAATGTTCTTGAAATTTGAAGCTTTAGCCATCCCTTTGTTGAAACCTGGTGGACGAATTCCTGAAAAAGGAAAAAGGATTACTCTAAGTGTGAAAAATGTTAATGACTTGAGTCGTGATGTAATAAAGTCTGATACTGCGAGTGTAAAAGTTCCTGAACTTGACTTGGAGCTGGCAAGCGGTACCCTGGGAGGAATTGTTACAACTGTTGAAGGCCTTGAGAGGGTCCATGGGTTTACTTTTGGAGATAGTCTTGATGAACATAGAAGAAGCAAGTGGCTAGACTTCAAAGCAAGCCTAAAGAAGCTTCTTAGCCTGGAAGAAGCTTGGACTCTAACTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTCAAAGACGACAATCAATTAACATGTTTGAAGGTGAAAGTGTGA 1332 0.4362 MEGNNREEIVDVGSVVEAVSADDGDAPLYNLESLCMRCGQNGITRFLLTLIPHFRKILLSAFECSHCGERNNEVQFAGEIQPRGCCYSLEIPSGEQKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERRKVAPETAEAIDQFLVKLRACATGESSFMFILDDPAGNSFIENQFAPSSDPYLTIKFYERTPEQQTSLGYLVDSTQIEGTTDEVPEGGEAVAANQMRGEPHGSVGAAAGHQAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGGCASPCETRMFLKFEALAIPLLKPGGRIPEKGKRITLSVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGIVTTVEGLERVHGFTFGDSLDEHRRSKWLDFKASLKKLLSLEEAWTLTLDDALANSFVAPATDDLKDDNQLTCLKVKV 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00219 443 Coils Coil 129 149 - -
Sebi3g00219 443 FunFam Zinc finger protein zpr1 319 442 - -
Sebi3g00219 443 Pfam ZPR1 zinc-finger domain 33 192 IPR004457 GO:0008270
Sebi3g00219 443 Pfam ZPR1 zinc-finger domain 315 423 IPR004457 GO:0008270
Sebi3g00219 443 FunFam Zinc finger protein ZPR1 23 78 - -
Sebi3g00219 443 Gene3D ZPR1, zinc finger domain 25 78 IPR042452 -
Sebi3g00219 443 NCBIfam ZPR1 zinc finger domain 35 217 IPR004457 GO:0008270
Sebi3g00219 443 PANTHER ZINC FINGER PROTEIN ZPR1 15 437 IPR040141 -
Sebi3g00219 443 SMART zpr1 33 193 IPR004457 GO:0008270
Sebi3g00219 443 SMART zpr1 289 425 IPR004457 GO:0008270
Sebi3g00219 443 Gene3D ZPR1, A/B domain 319 441 IPR042451 -
Sebi3g00219 443 Gene3D ZPR1, A/B domain 79 220 IPR042451 -
Sebi3g00219 443 FunFam zinc finger protein ZPR1 79 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00219 4 437 C2H2 Transcription Factor Family AT5G22480 67.538 0.0 621