Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00204 ATGCGGATGAGCTGTAACGGTTGCCGGGTACTCAGAAAAGGTTGCAGTGAGAATTGCAGCATAAGACCCTGTTTACAGTGGATCAAGAGCCCAGAATCCCAAGCCAATGCCACTGTCTTTCTAGCTAAGTTCTATGGCCGTGCTGGCCTCATGAACCTTGTCAACGCCGGCCCCGAGCATCTCCGTCCAGCGATTTTTCGTTCATTGCTGTACGAGGCATGCGGTCGGATAGTGAACCCGATTTACGGTTCGGTCGCCGCGGCTAATGGGCGGGGCCCACCACTCAAGGCCTACGACATACGCCACGTGTCCAAGGACGAGAACTCCGCCGCCGCGTCAAATGAAACTCACCAACGAGTCAAGACTCGGTCGCGTGTCAAGCGAACCGTCGCGGGCAAGCCAAAAGTATCCGCCAACGAGGAAAAAACTAAAAACAATAAGGGAACCGAATTAGGTTCGGCTGAACCGGATTCCGTACGGGATGCTGGAGTGCCACCAGTCCGAGGCGGCGAATGCGGTGGAAGGAGAGAGCAAAGAGAGCGAGAGCATGGTTCGGTGGAGACCGCGGAAACTTCGATTCTCTTCCGAGATGAACCGGAGTCGAACCCAAAGCGAAGTGACCGAACCGATGAGAGTGGTGGGTATCATGTTGGTCTAGAGCTGACGCTTGGGCTTGAACCGCTCTCACGTGCGCATCACGTGGTTCCGGTTGAAGAAGAGAAGGATTGA 729 0.5514 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVAAANGRGPPLKAYDIRHVSKDENSAAASNETHQRVKTRSRVKRTVAGKPKVSANEEKTKNNKGTELGSAEPDSVRDAGVPPVRGGECGGRREQREREHGSVETAETSILFRDEPESNPKRSDRTDESGGYHVGLELTLGLEPLSRAHHVVPVEEEKD 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00204 242 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Sebi3g00204 242 MobiDBLite consensus disorder prediction 106 218 - -
Sebi3g00204 242 MobiDBLite consensus disorder prediction 134 148 - -
Sebi3g00204 242 Pfam Lateral organ boundaries (LOB) domain 4 87 IPR004883 -
Sebi3g00204 242 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 223 - -
Sebi3g00204 242 MobiDBLite consensus disorder prediction 172 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00204 Sebi-Chr3 2975441 2976557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00204 1 241 AS2 family AT3G02550 46.786 9.00e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi3g00204 LOB 1.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00204 - - gmx:100812981 312.383