Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00136 ATGGCCAAAGAATTGGACGAGAGCCAGAGGTGGAAAGGTGGAGGCATAGGAGGAGGAATTGGAGGTGGTGCTGGCGGAGGCTATGGAGGTGGCAAATGTGGAGGAGTTGGAGGTGGACATGGTGGATTTGGAGGAGGAGTTGGTGGTGGGCATGGTGGCAGTTCTGGAGGAGTTGGTGATGCTAAGAGGCTAATCGGCAAGAAATTTAGCGATGCCGTCATTCAAAATGACATAATGTTGTGGCCATTCAAGGTGATTGCTGGAGTTAATGACAAACCCATGATTGTTGTTAAGTACAAGGGTCAGGAGAAACGTCTTTCTGCTGAGGAAATCTCATCTATGGTCCTTGTAAAGATGCGGGAGATTGCAGAGGATTATTTGGAGTCTCCGGTCAAGAACGCTGTTATCACTGTGCCTGCTTATTTCAATGACTCTCAGCGAAAAGCCACCAAAGATGCAGGTGCCATTGCTGGCCTTAATGTCTTGAGGATAATCAATGAACCAACTGCTGCTGCTATTGCATATGGCCTTGACAAGAGAAATAATTGTGTTGGAGAGCGAAATATTCTCGTATTTGACCTTGGTGGTGGCACCTTTGATATGTCTATCCTTACAATTAAGGATAAGGTCTTTGAAGTTAAGGCCACAGATGGTAACACTCACCTTGGTGGAGAGGACTTCGATAACAGAATGGTGAACTACTTTGTAAAAGAGTTCAAGAGAAAAAATAAAGTGGACATTAGTGGGAATCCAAAAGCCCTGAGCAGGTTGAGAACTGCGTGCGAGAAGGCAAAAAAGAGACTCGCATTTGCTGTTGCTACGACCATAGAGTTAGATGCTTTATTTCAGGGTATTTACTTTTGTTTTCCAATCACTCGTGCAAGGTTTGAGGAAATCAATTTGGAACTTTTTGAAGAGTGTATGGAGACAGTTAAGAGTTGTCTTGATGATGCAAAAATGGACAAGAGTAGTATACATGATATTGTCCTTGTTGGTGGATCTTCTAGAATTCCTAAAGTGCAGCAGCTATTGCGGGACTTTTTCAATGGGAAGGATTTGTGCAAGGGTATCAACCCTGATGAGGCTGTGGCTTATGGCGCTGCTGTGCAGGCTGCCATATTGAGTGAAGGTATTAAGAATGTTCCAAATTTGAAGCTGTTGGATGTTACACCCGTCTCTAGGTTGGAGGCTATTACATGA 1200 0.4417 MAKELDESQRWKGGGIGGGIGGGAGGGYGGGKCGGVGGGHGGFGGGVGGGHGGSSGGVGDAKRLIGKKFSDAVIQNDIMLWPFKVIAGVNDKPMIVVKYKGQEKRLSAEEISSMVLVKMREIAEDYLESPVKNAVITVPAYFNDSQRKATKDAGAIAGLNVLRIINEPTAAAIAYGLDKRNNCVGERNILVFDLGGGTFDMSILTIKDKVFEVKATDGNTHLGGEDFDNRMVNYFVKEFKRKNKVDISGNPKALSRLRTACEKAKKRLAFAVATTIELDALFQGIYFCFPITRARFEEINLELFEECMETVKSCLDDAKMDKSSIHDIVLVGGSSRIPKVQQLLRDFFNGKDLCKGINPDEAVAYGAAVQAAILSEGIKNVPNLKLLDVTPVSRLEAIT 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00136 399 FunFam Endoplasmic reticulum chaperone BiP 58 189 - -
Sebi3g00136 399 FunFam Heat shock 70 kDa 223 306 - -
Sebi3g00136 399 Gene3D - 59 114 - -
Sebi3g00136 399 ProSitePatterns Heat shock hsp70 proteins family signature 3. 328 342 IPR018181 -
Sebi3g00136 399 FunFam Heat shock cognate 70 kDa protein 2 307 354 - -
Sebi3g00136 399 Gene3D - 58 372 - -
Sebi3g00136 399 SUPERFAMILY Actin-like ATPase domain 186 375 IPR043129 -
Sebi3g00136 399 Gene3D - 180 354 - -
Sebi3g00136 399 Pfam Hsp70 protein 58 393 IPR013126 GO:0005524|GO:0140662
Sebi3g00136 399 Gene3D Actin; Chain A, domain 4 223 306 - -
Sebi3g00136 399 PANTHER HEAT SHOCK PROTEIN 70KDA 58 393 IPR013126 GO:0005524|GO:0140662
Sebi3g00136 399 ProSitePatterns Heat shock hsp70 proteins family signature 2. 191 204 IPR018181 -
Sebi3g00136 399 SUPERFAMILY Actin-like ATPase domain 58 179 IPR043129 -
Sebi3g00136 399 PRINTS 70kDa heat shock protein signature 383 399 - -
Sebi3g00136 399 PRINTS 70kDa heat shock protein signature 197 207 - -
Sebi3g00136 399 PRINTS 70kDa heat shock protein signature 325 341 - -
Sebi3g00136 399 PRINTS 70kDa heat shock protein signature 357 377 - -
Sebi3g00136 399 PRINTS 70kDa heat shock protein signature 134 154 - -
Sebi3g00136 399 FunFam Heat shock 70 kDa protein 59 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00136 Sebi-Chr3 1989282 1992547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00136 55 393 Calmodulin-binding Proteins AT3G12580 72.941 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00136 K03283 - gmx:102667578 541.576