Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00134 ATGGCCAAAAAAAATGAACTTTGTGCCATAGGAATCGACCTGGGCACAACGTACTCATGTGTTGGAGTATGGTCGGAACAACATAGTAGAGTGGAAATTATCCACAATGATCAAGGCAACAAAACCACACCTTCTTTTGTTGCATTCACTGACAAACAAAGATTGATTGGAGGTGCTGCTGAAAATCAGGCTGCCATTAACCCGGAGAATACAGTCTTCGATGCTAAGAGGCTAATTGGTAGGAAATTTAGCGATGCTGTCATTCAGAAAGATATACTGTTGTGGCCATTCAAGGTAATTGCTGGTGTTAATGACAAACCCATAATTGTTGTTAAGTACAAGGGTCAAGTGAAACGCCTTTCAGCAGAGGAAATCTCATCCATGGTCCTTGCAAAGATGCGGGAGATTGCAGAGACATATTTGCAATCACCAGTGAAGAATGCTGTTATTACTGTGCCTGCTTATTTCAATGATTATCAGCGAAAAGCCACCAAAGATGCAGGTGTCATTGCTGGCCTCAATGTTATGCGGATAATCAATGAGCCCACTGCTGCAGCCATTGCATATGGCCTTGACAAAAGAACTAATTGTGATAAGGTCTTCCAAGTTAAGGCTACTCTTGGAAACACTCACCTTGGGGGAGGGGATTTCGACAATAGAATGGTGAACTACTTCGTACAGGAATTCAAGAAGAAGAACAAAGTGGACATTGGTGGTAACCCAAGAGCTCTGAGGAGGTTGAGAACTGCATGTGAGAGATCAAAAAGGACACTCACTTTTGCTGTTGATACCACCATAGAGTTAGATGCTTTATTTCAGGGCATTGACTTCTGTTTTCCAATCACTTGTGCAAGGTTTGAGGAAATCAATATGGACCTTTTTGAAGAGTGTATGGAGACAGTTAAGAGGTGTCTCAATGATGCTAAGATGGATAAGAGTAGCGTCCATGATATTGTCCTCATTGGTGGCTCTTCAAGGATTCCTAAAGTGCAGCAGTTATTGCAAGACTTTTTCAATGGGAAGGATCTGTGCAAGGACATCAACCCTGATGAGGCTGTAGCTTATGGCGCAGCTGTTCAGGCTGCTTTGTTGAGTGAAGGTATTAAGAATGTTCCAAAATTGAAGCTGTTGGATGTTACACCGCTGTCTCTTGGTTGGGGGTTACAACATGATCTCATGGGTGTAGTGGTTCCTAAGAATACTACTATTCCTGTTAAGATGACAGAAGAATTCTTCACTGTTGAAGATAACCAATCTGATGTTTTTATTGTGGTTCATGAAGGTGAGAGAACAAGGGCCAGTGATAACAATGTGCTTGGATCTTTTACTCTTTCTGGCATGCCTCCTGCTCCTGCTGGCCATCCTTTTGATGTATGCTTTGCTGTTGATGAAAATGGTATCCTAACCGTTTCTGCTAAGGAAAATACCACTGGTAATAAAAACAAGATTTCCATAACTAATGACAGAGAAAGACTGTCATATGAAGAGATTAGAAGATTGATTCAAGAAGCTGAGAAGTACCAGGCTGAAGATAGAAAATTTCTTAGGAAGGTCCAAGCAATGAATGCTTTGGATCATTACATTTACAAGATGAGGAATGTCTTAAAGAAGAAAGATATCAATTCAAAGCTTTGCTTACGAGAAAAGAAGAAGATCATTTCTGCAATTACTAATGCTGAAGTTTTGCTTGATGATAATAACCAACAAGATGAAGATGTTTTTGTGGATTATCTGAAGAAGCTCAAGAGTACCGCTGAAGGCATCATAGGCAAGATTGGCTAG 1782 0.4074 MAKKNELCAIGIDLGTTYSCVGVWSEQHSRVEIIHNDQGNKTTPSFVAFTDKQRLIGGAAENQAAINPENTVFDAKRLIGRKFSDAVIQKDILLWPFKVIAGVNDKPIIVVKYKGQVKRLSAEEISSMVLAKMREIAETYLQSPVKNAVITVPAYFNDYQRKATKDAGVIAGLNVMRIINEPTAAAIAYGLDKRTNCDKVFQVKATLGNTHLGGGDFDNRMVNYFVQEFKKKNKVDIGGNPRALRRLRTACERSKRTLTFAVDTTIELDALFQGIDFCFPITCARFEEINMDLFEECMETVKRCLNDAKMDKSSVHDIVLIGGSSRIPKVQQLLQDFFNGKDLCKDINPDEAVAYGAAVQAALLSEGIKNVPKLKLLDVTPLSLGWGLQHDLMGVVVPKNTTIPVKMTEEFFTVEDNQSDVFIVVHEGERTRASDNNVLGSFTLSGMPPAPAGHPFDVCFAVDENGILTVSAKENTTGNKNKISITNDRERLSYEEIRRLIQEAEKYQAEDRKFLRKVQAMNALDHYIYKMRNVLKKKDINSKLCLREKKKIISAITNAEVLLDDNNQQDEDVFVDYLKKLKSTAEGIIGKIG 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00134 593 PANTHER HEAT SHOCK PROTEIN 70KDA 9 556 IPR013126 GO:0005524|GO:0140662
Sebi3g00134 593 Gene3D Actin; Chain A, domain 4 214 296 - -
Sebi3g00134 593 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 520 592 IPR029048 -
Sebi3g00134 593 FunFam Heat shock protein 70 10 208 - -
Sebi3g00134 593 ProSitePatterns Heat shock hsp70 proteins family signature 3. 318 332 IPR018181 -
Sebi3g00134 593 Gene3D - 73 128 - -
Sebi3g00134 593 Gene3D - 198 344 - -
Sebi3g00134 593 FunFam heat shock 70 kDa protein-like 73 128 - -
Sebi3g00134 593 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 369 521 IPR029047 -
Sebi3g00134 593 FunFam Heat shock 70 kDa 213 296 - -
Sebi3g00134 593 Coils Coil 497 517 - -
Sebi3g00134 593 FunFam Heat shock 70 kDa protein 368 521 - -
Sebi3g00134 593 Gene3D - 522 593 IPR029048 -
Sebi3g00134 593 SUPERFAMILY Actin-like ATPase domain 198 365 IPR043129 -
Sebi3g00134 593 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 370 525 IPR029047 -
Sebi3g00134 593 PRINTS 70kDa heat shock protein signature 38 50 - -
Sebi3g00134 593 PRINTS 70kDa heat shock protein signature 315 331 - -
Sebi3g00134 593 PRINTS 70kDa heat shock protein signature 148 168 - -
Sebi3g00134 593 PRINTS 70kDa heat shock protein signature 453 469 - -
Sebi3g00134 593 PRINTS 70kDa heat shock protein signature 60 68 - -
Sebi3g00134 593 PRINTS 70kDa heat shock protein signature 347 367 - -
Sebi3g00134 593 PRINTS 70kDa heat shock protein signature 8 21 - -
Sebi3g00134 593 PRINTS 70kDa heat shock protein signature 373 392 - -
Sebi3g00134 593 Pfam Hsp70 protein 9 195 IPR013126 GO:0005524|GO:0140662
Sebi3g00134 593 Pfam Hsp70 protein 200 589 IPR013126 GO:0005524|GO:0140662
Sebi3g00134 593 Gene3D - 10 193 - -
Sebi3g00134 593 Gene3D - 345 362 - -
Sebi3g00134 593 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Sebi3g00134 593 FunFam Heat shock cognate 70 kDa protein 2 297 344 - -
Sebi3g00134 593 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00134 Sebi-Chr3 1969008 1970957 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00134 1 592 Calmodulin-binding Proteins AT3G12580 64.725 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00134 K03283 - gmx:102667578 877.856