Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00132 ATGGCAAGACAAAATGATGGATGTGCGGTAGGAATAGACCTTGGCACGACCTACTCATGTGTTGCAGTATGGCAAGAGCAACACTGTCGAGTGGAGATCATCCACAATGACCAAGGCAACAGAACCACACCTTCATGTGTTGCTTTCACAGACAACCGAAGATTGATTAGTGATGCTGCTAAGAATCAGGCTGCCACCAACCCTGAGAACACTGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAATTTAGTGATCCAATTGTACAAAAGGATATCCTGTTGTGGCCATTTAAGGTCATTGCTGGTGTTAATGACAAACCAATGGTTGTTGTTAAGTACAAGGGTCAGGAGAAGCACCTTTCAGCTGAGGAAATTTCATCAATGGTCCTCACAAAGATGAGGGAGACTGCAGAGGCATATTTGGAGTCACCTGTGAAGAATGCTGTTGTCACTGTGCCTGCTTATTTCAATGATTCTCAGCGAAAAGCCACCATAGATGCTGGTTCCATTGCAGGCCTCAATGTTATGCGGATCATCAATGAGCCCACTGCTGCAGCAATTGCATATGGCCTTGACAAGAGAACTAATTGTGTTGGAGAAAGAAATATTTTTGTATTTGACCTTGGTGGTGGCACTTTTGATGTGTCTATCCTTACAATTAAGGACAAGGTCTTTCAAGTTAAGGCCACTGCTGGAAACACTCACCTTGGAGGAGAGGACTTTGACAACAGAATGGTGAAGTACTTTGCAGAGGATTTCAAAAGGAAGAGCAAACTAGACATTAGTGGAAATCCTAAAGCCCTTAGAAGGTTGAGAAGTGCATGTGAGAGGGCCAAAAGGACTCTCTCGTTCACTCCTTTTACCACAATAGAACTTGATGGTTTATTTCAGAGTGTTGACTTCTCTTCATCAATCACCCGTGCAAGGTTTGAGGAACTTAACATGGACTTATTCACAGAGTGTATGGAGATAGTAGATAGGTGTTTTGTTGATGCTAAGATGGATAAGAGAAGTGTACATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCCAAAGTGAAGGAGCTTTTGGAGGAATTTTTCAAGGGGAAGAATCTGTGCATTAGCATCAATCCTGATGAAGCTGTGGCTTATGGTGCTGCTGTCCAAGCTGCTTTGTTGAGTGAAGGTGTTAAGAATGTTCCAGATTTGGTATTGTGTGATGTTACACCTCTGTCACTTGGTATAAGGGTGAGAGGAGATATTATGAGTATAGTGATTCCTAGAAACACTACCATTCCTGTGAGGAAGAAAAGAGTATACACTACAATGAAAGATGGTCAATTTGCTGTCAGAATTTCTGTGTATGAAGGTGAGAGGACAAGAGCTGCTGATAACAATTTATTGGGATCTTTTATTCTTTCTGGCTTTCCTTTTGCTCCACGTGGCTACCCTTTTGATATATGTTTAGCTATGGATGAATATGGTATCCTCACTGTTTTTGCTGAGGACAAATTCACAGGCAACAAGAATGAGATTACCATAACCAATGAAGGAAGACTGCCATCGGAAGAAATTAAGAGAATGATTGAAGAAGCTGCAATGTACAATGATGAAGATAAGAAATATAAGGAAAAGGTTAATGCAATGAATGCTTTGGATAATTACCTTTACAAGGTGAAGAATCATATGAAGGATGCTTATATTAATTGTAATATGTTACCACAAGGTGAGCAGAAAATTTGGGCTGCAATTAGAGAAGCTGATAATTTGCTTGATGACAACCAACAGGCAGAAAGGTATGTGTTTGAGAACTGTCTGAACAAGCTAAAGAGCATTTTTGAACCAATTTTGGTCAAGAGGAAGCGTGGATGGAATGATGAGGTAATTGTTTTGGATGATTAA 1887 0.4059 MARQNDGCAVGIDLGTTYSCVAVWQEQHCRVEIIHNDQGNRTTPSCVAFTDNRRLISDAAKNQAATNPENTVFDAKRLIGRKFSDPIVQKDILLWPFKVIAGVNDKPMVVVKYKGQEKHLSAEEISSMVLTKMRETAEAYLESPVKNAVVTVPAYFNDSQRKATIDAGSIAGLNVMRIINEPTAAAIAYGLDKRTNCVGERNIFVFDLGGGTFDVSILTIKDKVFQVKATAGNTHLGGEDFDNRMVKYFAEDFKRKSKLDISGNPKALRRLRSACERAKRTLSFTPFTTIELDGLFQSVDFSSSITRARFEELNMDLFTECMEIVDRCFVDAKMDKRSVHDVVLVGGSSRIPKVKELLEEFFKGKNLCISINPDEAVAYGAAVQAALLSEGVKNVPDLVLCDVTPLSLGIRVRGDIMSIVIPRNTTIPVRKKRVYTTMKDGQFAVRISVYEGERTRAADNNLLGSFILSGFPFAPRGYPFDICLAMDEYGILTVFAEDKFTGNKNEITITNEGRLPSEEIKRMIEEAAMYNDEDKKYKEKVNAMNALDNYLYKVKNHMKDAYINCNMLPQGEQKIWAAIREADNLLDDNQQAERYVFENCLNKLKSIFEPILVKRKRGWNDEVIVLDD 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00132 628 PANTHER HEAT SHOCK PROTEIN 70KDA 9 572 IPR013126 GO:0005524|GO:0140662
Sebi3g00132 628 Gene3D Actin; Chain A, domain 4 237 320 - -
Sebi3g00132 628 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 548 IPR029047 -
Sebi3g00132 628 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 618 IPR029048 -
Sebi3g00132 628 Pfam Hsp70 protein 9 612 IPR013126 GO:0005524|GO:0140662
Sebi3g00132 628 PRINTS 70kDa heat shock protein signature 8 21 - -
Sebi3g00132 628 PRINTS 70kDa heat shock protein signature 211 221 - -
Sebi3g00132 628 PRINTS 70kDa heat shock protein signature 371 391 - -
Sebi3g00132 628 PRINTS 70kDa heat shock protein signature 38 50 - -
Sebi3g00132 628 PRINTS 70kDa heat shock protein signature 339 355 - -
Sebi3g00132 628 PRINTS 70kDa heat shock protein signature 397 416 - -
Sebi3g00132 628 PRINTS 70kDa heat shock protein signature 60 68 - -
Sebi3g00132 628 PRINTS 70kDa heat shock protein signature 148 168 - -
Sebi3g00132 628 Gene3D - 194 368 - -
Sebi3g00132 628 Gene3D - 73 128 - -
Sebi3g00132 628 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Sebi3g00132 628 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 513 IPR029047 -
Sebi3g00132 628 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Sebi3g00132 628 FunFam Heat shock protein 70 10 201 - -
Sebi3g00132 628 Gene3D - 515 618 IPR029048 -
Sebi3g00132 628 Gene3D - 10 384 - -
Sebi3g00132 628 SUPERFAMILY Actin-like ATPase domain 200 389 IPR043129 -
Sebi3g00132 628 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Sebi3g00132 628 Coils Coil 520 540 - -
Sebi3g00132 628 FunFam Heat shock 70 kDa protein 391 544 - -
Sebi3g00132 628 FunFam Heat shock 70 kDa 237 320 - -
Sebi3g00132 628 FunFam Heat shock 70 kDa protein 73 128 - -
Sebi3g00132 628 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00132 Sebi-Chr3 1949856 1951935 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00132 1 618 Calmodulin-binding Proteins AT3G12580 65.700 0.0 829