Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00128 ATGCTTTTGCTTTGGTTCTTTCACTGCTTGTGGCAAGAGCAACACAGTAGAGTGGAGATTATCCACAACGATCAAGGTAACAAAACCACACCTTCATGTGTTGCTTTCACTGACATCCAAAGATTGATTGGTGATGCTGGCCGCCGCCAATGTCTTTGGATATGGCCATTCAAGGTCGTTGCTGGTGTTAATGACAAACCCATGATTGTTGTTAAGTACAAGGGTCAGGAGAAGCACCTTTCAGCTGAGGAAATTTCATCAATGCGAAAAGCCACCATAGATGCTGGTGCCATTGCTGGCCTCAATGTTATGCGGATCATCAATGAGCCCACTGCTGCAGCTCTTGCATATGGTCTTGACAAGAGAAATAATTGTGTTGGAGAGCGAAATATTTTTGTATTTGATCTTGGTGGTGGCACTTTTGATGTGTCTATCCTTACAATTAAGGATAAGGTCTTCCAAGTTAAGGCTACTGCTGGAAATACTCACCTTGGGGGAGAGGACTTTGATAACAGAACGTTGAACTACTTTGTACAGGAGTTCAAGAGAAAAAATAAACTGGATGTTAGTGATAACCCAAGAGCCCTGAGGAGGTTGAGAACTGCGTGTGAGAGGGCAAAAAAGACTCTGTCTTTTGCTGTTGTTACCACCATAGAGGTAGATACTTTGTTTCAGGGCATTGACTTCTGCTCTTCAATCACACGTGCAAAGTTTGAGGAAATCAATATGGAACTTTTTGAAGAGTGTATGGAGACAGTTGAGAGGTGTCTTGTTGATGCTAAGATGCAAAAGAGTGATATACATGATGTTGTTCTTGTTGGTGGCTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGGACTTCTTCAAGGGCTCTGCTTTGTTGAGTGAAGACATTAAGAATGTTCCAAACTTACTGCTGTTGGATGTCACACCGCTGTCTCTTGGTTCATCAGTAATTGGAGATATCATGGATGTGATGATTCCTAGAAACACTACCATTCCAGTCAAGAAGACACGAAAATACTATACATGTTACGATAACCAAACCAGTGTATTGACTGAGGTTTACGAGGGTGAGAGAGCAAGAGCAAGTGATAACAATCTGCTTGGCTTTTTTCGTCTTTCTGGCATCCCTCCTGTTCCTCGTGGTCATCCTCACCATCTATGCTTTGTTATTGATAAAAATGGAATCCTCACTGTTTCTGCTAAGGATAAAACCACTGGCAATTCAAACGAGATTACCATAACCAATGACAGAGAAAGGCTGTCAACTGTAGAAATTGAAAGATTGATTCAAGAAGCTGAGAACTACCAGGCTGAAGATAAGAAGTTTCTCAGGAAGGCCAATGCAATGAATGCGTTGGATGATTATGTTTACAAGATGAGGAATGCTTTTAAGAAGGATATCAATTCAAAGCTCTCCTTACTACAACATTTTTTGTTTAGACCACACTTTCATCATCCAAGGTTTTCAAAATTGGGGAATGAGGAATGGACCAAGGGAGGCGGCATCAACGGTCGCGCCAAAGTGGCGCTCGGCGATGAAGGCCACGCAGCGGCGCTACAGCAGTGCGGTGGTGCAACGAAGAGAGGGAAAGAGCTGGCGATTTGCGGAGGGCGTGGTGGCGTAAGGGCGGCGGTCTCACCTCGGCAAAGTGGATTCAGGTTGTAA 1677 0.4371 MLLLWFFHCLWQEQHSRVEIIHNDQGNKTTPSCVAFTDIQRLIGDAGRRQCLWIWPFKVVAGVNDKPMIVVKYKGQEKHLSAEEISSMRKATIDAGAIAGLNVMRIINEPTAAALAYGLDKRNNCVGERNIFVFDLGGGTFDVSILTIKDKVFQVKATAGNTHLGGEDFDNRTLNYFVQEFKRKNKLDVSDNPRALRRLRTACERAKKTLSFAVVTTIEVDTLFQGIDFCSSITRAKFEEINMELFEECMETVERCLVDAKMQKSDIHDVVLVGGSSRIPKVQQLLQDFFKGSALLSEDIKNVPNLLLLDVTPLSLGSSVIGDIMDVMIPRNTTIPVKKTRKYYTCYDNQTSVLTEVYEGERARASDNNLLGFFRLSGIPPVPRGHPHHLCFVIDKNGILTVSAKDKTTGNSNEITITNDRERLSTVEIERLIQEAENYQAEDKKFLRKANAMNALDDYVYKMRNAFKKDINSKLSLLQHFLFRPHFHHPRFSKLGNEEWTKGGGINGRAKVALGDEGHAAALQQCGGATKRGKELAICGGRGGVRAAVSPRQSGFRL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00128 558 Pfam Hsp70 protein 88 473 IPR013126 GO:0005524|GO:0140662
Sebi3g00128 558 Pfam Hsp70 protein 14 51 IPR013126 GO:0005524|GO:0140662
Sebi3g00128 558 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 300 476 IPR029047 -
Sebi3g00128 558 Gene3D - 122 295 - -
Sebi3g00128 558 ProSitePatterns Heat shock hsp70 proteins family signature 2. 133 146 IPR018181 -
Sebi3g00128 558 Gene3D - 89 121 - -
Sebi3g00128 558 SUPERFAMILY Actin-like ATPase domain 128 293 IPR043129 -
Sebi3g00128 558 FunFam Heat shock 70 kDa protein 299 453 - -
Sebi3g00128 558 FunFam Heat shock 70 kDa 165 248 - -
Sebi3g00128 558 SUPERFAMILY Actin-like ATPase domain 12 121 IPR043129 -
Sebi3g00128 558 PANTHER HEAT SHOCK PROTEIN 70KDA 11 469 IPR013126 GO:0005524|GO:0140662
Sebi3g00128 558 Coils Coil 429 449 - -
Sebi3g00128 558 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 302 457 IPR029047 -
Sebi3g00128 558 FunFam heat shock 70 kDa protein-like 3 129 - -
Sebi3g00128 558 FunFam Heat shock protein ssb1 37 88 - -
Sebi3g00128 558 Gene3D - 38 87 - -
Sebi3g00128 558 Gene3D Actin; Chain A, domain 4 165 248 - -
Sebi3g00128 558 PRINTS 70kDa heat shock protein signature 25 37 - -
Sebi3g00128 558 PRINTS 70kDa heat shock protein signature 385 401 - -
Sebi3g00128 558 PRINTS 70kDa heat shock protein signature 267 283 - -
Sebi3g00128 558 ProSitePatterns Heat shock hsp70 proteins family signature 3. 270 284 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00128 Sebi-Chr3 1868633 1871028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00128 7 475 Calmodulin-binding Proteins AT3G12580 58.076 0.0 615