Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00126 ATGGCCAAAAAAAATGAGGGACATGCTATAGGAATTGACCTTGGAACTACCTACTCATGTGTTGCAGTATGGCAGGAACAAAACAACCGAGCAGAGATCATCCACAATGAACAAGGAAACAGAACCACTCCTTCTTTTGTTGCTTTCACTGACACAAAAAGGTTGGTAGGAGATGCTGCCAAAAATCAGGCTGCCTCCAATCCATCCAACACTGTCTTTGATGCAAAGAGGCTAATTGGAAGGAAATATAGTGATTCCACAATTCAAGACGATGTAATGTTGTGGCCCTTTAAGGTCATTTCTGGTACTAATGATAAACCCACTATCGTTGTTAAGTACAAGGGGGAGGAAAAGCACCTTGTTGCAGAGGAAATCTCATCTATGGTCCTTTCAAATATGAGGGAGATTGCAGAGGCATATTTGGATTCATCTGTGAAAAATGCTGTTATCACTGTGCCTGCTTATTTCAATGATTCTCAACGAAAAGCCACCAAAGATGCTGGTGCCATTGCTGGCCTCAATGTTATGAGGATAATCAATGAGCCTACTGCTGCTGCTCTTGCATATGGCCTTCAAAACAGAGCTGATTTTGTTGGAAAGAGGAATGTTTTCATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTCTTCTCACAATTAAGGGTGATAGATTGGTGAACCATTTTGTGAAGGAGTTCAAGAGGAAAAGCAAGGTTGACATCAGTGGGAACCCAAAAGCCTTGAGGAGGTTGAGAAGTGATTGTGAGAGGGCAAAAAGGATACTTTCATATGAATCAGAGACTACAATTGAAGTAGATGCTTTATGTAAGGGAATTGACTTCAGTTCATTACTCACCCGTGCTAGATTTGAGCAACTCAACATGGACCTATTCAAAAAGTGTATGGAGATTGTAGATAGGTGTATTGTTGATGCTAAGATGGAGAAGAGTGATGTAGATGATGTTGTCCTTGTTGGTGGCTCTTCTAGAATTCCAATAGTGCAGCAGCTGTTGGAGGAATTTTTCATTGGGAAGGATCTTTGTAAGAGCATCGACCCTGATGAGGCTGTTGCTTATGGTGCAGTTGCTGTTTTGTTGAGTGATGACATTAAGAATGTTCCCAATTTGGTGCTATTGGATGTTACACCTTTGTCTCTTGGCATATCAATCAGAGGAGATGTTATGAGTGTGGTGATTCCTAGGAACACTACCATTCCAGTCAAGAAGACAAAAGAGTATGTTACAGTTGAGGATAACCAAACCAGTGTATTGATTGAGGTTTACGAGGGTGAGAGAGCAAGAGCAAGTGATAACAATTTGCTAGGTTCTTTTCTTCTTTCTGGTATTCCTCCTGCTCCTCGTGGTCATCCTCATGATGTATGCTTTGCTATTGATGAAAATGGCATCCTCAATGTTTCTGCTATGGAAAAAACCACTGGCAATTCAAATGAGATTACCATAATCAATGACAAAGAAAGACTGTCAACTGAAGAAATTGAAAGATTGATTCAAGAAGCTGAAAATTACAGCTCTGAAGATAAGGATTTCAAAGAGAAGGCTAATGCAATGAATGCTTTGGATGATTACCTTCACGATATGAAGAAAGTAATGCAGGATAAGTGTGTCAGTTCTAGGCTTACCCCAATGGACAAAATTAAGATCAATGATGCATTTATAAAGGGCAAAAGTTTGATTGATAATGAATTAATTTATTTTGGGATGAGTGAGCGTGTTCAGGGGTCTCCACCGACGGACGAACAGCCAAGGCGATCAAGGGGAAAAAAAATATGCAAGAAGGTGGCGATATTTGCATGCAAAACGACATTTTCACTTATGGTTGGAGATCCTGTATCTCCCACTATTGATTTCATGTCCCTTACTGTTGATATTGTGGATGCCCTGATTTCAAATTGA 1914 0.4028 MAKKNEGHAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFTDTKRLVGDAAKNQAASNPSNTVFDAKRLIGRKYSDSTIQDDVMLWPFKVISGTNDKPTIVVKYKGEEKHLVAEEISSMVLSNMREIAEAYLDSSVKNAVITVPAYFNDSQRKATKDAGAIAGLNVMRIINEPTAAALAYGLQNRADFVGKRNVFIFDLGGGTFDVSLLTIKGDRLVNHFVKEFKRKSKVDISGNPKALRRLRSDCERAKRILSYESETTIEVDALCKGIDFSSLLTRARFEQLNMDLFKKCMEIVDRCIVDAKMEKSDVDDVVLVGGSSRIPIVQQLLEEFFIGKDLCKSIDPDEAVAYGAVAVLLSDDIKNVPNLVLLDVTPLSLGISIRGDVMSVVIPRNTTIPVKKTKEYVTVEDNQTSVLIEVYEGERARASDNNLLGSFLLSGIPPAPRGHPHDVCFAIDENGILNVSAMEKTTGNSNEITIINDKERLSTEEIERLIQEAENYSSEDKDFKEKANAMNALDDYLHDMKKVMQDKCVSSRLTPMDKIKINDAFIKGKSLIDNELIYFGMSERVQGSPPTDEQPRRSRGKKICKKVAIFACKTTFSLMVGDPVSPTIDFMSLTVDIVDALISN 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00126 637 Gene3D - 349 362 - -
Sebi3g00126 637 Gene3D - 194 222 - -
Sebi3g00126 637 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 367 543 IPR029047 -
Sebi3g00126 637 Gene3D - 73 128 - -
Sebi3g00126 637 FunFam Heat shock protein 70 10 200 - -
Sebi3g00126 637 SUPERFAMILY Actin-like ATPase domain 8 192 IPR043129 -
Sebi3g00126 637 PRINTS 70kDa heat shock protein signature 8 21 - -
Sebi3g00126 637 PRINTS 70kDa heat shock protein signature 60 68 - -
Sebi3g00126 637 PRINTS 70kDa heat shock protein signature 455 471 - -
Sebi3g00126 637 PRINTS 70kDa heat shock protein signature 148 168 - -
Sebi3g00126 637 PRINTS 70kDa heat shock protein signature 375 394 - -
Sebi3g00126 637 PRINTS 70kDa heat shock protein signature 38 50 - -
Sebi3g00126 637 PRINTS 70kDa heat shock protein signature 319 335 - -
Sebi3g00126 637 PRINTS 70kDa heat shock protein signature 351 371 - -
Sebi3g00126 637 PANTHER HEAT SHOCK PROTEIN 70KDA 9 550 IPR013126 GO:0005524|GO:0140662
Sebi3g00126 637 Pfam Hsp70 protein 9 221 IPR013126 GO:0005524|GO:0140662
Sebi3g00126 637 Pfam Hsp70 protein 224 557 IPR013126 GO:0005524|GO:0140662
Sebi3g00126 637 ProSitePatterns Heat shock hsp70 proteins family signature 3. 322 336 IPR018181 -
Sebi3g00126 637 Gene3D Actin; Chain A, domain 4 224 300 - -
Sebi3g00126 637 Coils Coil 492 519 - -
Sebi3g00126 637 Gene3D - 301 348 - -
Sebi3g00126 637 SUPERFAMILY Actin-like ATPase domain 200 363 IPR043129 -
Sebi3g00126 637 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Sebi3g00126 637 FunFam heat shock 70 kDa protein-like 73 128 - -
Sebi3g00126 637 FunFam Heat shock 70 kDa 221 300 - -
Sebi3g00126 637 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 372 527 IPR029047 -
Sebi3g00126 637 FunFam Heat shock 70 kDa 370 523 - -
Sebi3g00126 637 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Sebi3g00126 637 Gene3D - 10 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00126 Sebi-Chr3 1809451 1814265 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00126 1 569 Calmodulin-binding Proteins AT3G12580 65.152 0.0 773