Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00124 ATGAGTTCTTCCATTTTGCAATATAACTTGTATTGGAGTAGTAACCACGTCTCCAGCTGCATAATAATAGTAGGAATCGACCTTGGCACGACCTACTCATGTGTTGCTGTGTGGCAAGAGCAACACTGCCGAGTGGAGGTCATCCACAATGACCAAGGCAACAGAATCACACCTTCTTGTGTTGCTTTCACAGACAATCAGAGATTGATTGGTGATGCTGCTAAGAATCAGGCTGCCACCAACCCAACCAACACTGTCTTTGATGTGAAGAGGTTAATTGACAGAAGATATAGTGATCCCGCTATTCAGAATGATCTAATGTTATGGCCATTTAAGGTCATCTCTGGTATTGATGACAAACCCATGATTGTTGTTAAGTACAAGGGTCAAGAGAAGCATATTTCTGCAGAGGAAATTTCGTCTATGGTACTCACAAAGATGCGTAAGATAGCGGAGGAATATTTGGAGTCACCAGTAAAGAATGCTGTTGTTACTGTGCCTGCTTATTTCAATGACTCTCAGCGCCAAGCTACCAAAGATGCTGAGCGAAATATTTTCATCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTCACCATTAAGGGTGATGTCTTTCAAGTTAAGGCCACTGCCGGAGACACCCACCTTGGAGGAGAGGATTTTGATAACAGAATGGTGAACAACTTCGTACAAGAGTTCAAGAGGAAGAACAAAGTGGACATTAGTGGGAACCCAAGAGCACTGAGGAGGTTGAGAACTGCATGTGAGAGGGCAAAAAGGACACTATCTTTTGCTGTTGATACCACCATTGAGGTAGATGCTTTATTTGAGAGCATTGACTTCTGTTCATCAATCACTCGTGCAAGGTTTGAGGAACTCAACATGGACCTCTTTAGAAAGTGTATGGAGACAGTAGAAAGGTGTATTAATGATTCTAAGATGGACAAAAATAATATACATGATGTTGTCTTTGTTGGTGGCTCATCTAGGATTCCCAAAGTGCAGCAGCTAATACAGGATTTCTTCAAGGGGAAGGATCTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGAGCTGCTGTCCAGGCTGCTTTGTTGAATAAAAGCAATAAGTTTGTACCAAACTTAGTGCTATTGGATGTTACACCGCTCTCACTTGGTATATACGAAACAAGTGGAGATTTCCAATCCAGTGTCCCCATTAAAGTTTATGAGGGAGAGAGGACAAGAGCCAGTGATAACAACTTGCTGGGTTTGTTTGATCTCTGTGGCATTCCTTCTGTTCCTCGTGGCCATCCTTTCAATGTATTCTTTGACATAGATGCTAATGGTATTCTAAAGGTATCAGCTGAGGAAGAAACCACTGGCAGCAGGAACCAAATTACCATAACCAATGACAAAGGAAGACCGTCAACTCAAGAAATTATGAGAGATACAAAGCTGAAGATAAGAAGTACCAGAAGAAAGCTAAAGCGATAA 1491 0.4212 MSSSILQYNLYWSSNHVSSCIIIVGIDLGTTYSCVAVWQEQHCRVEVIHNDQGNRITPSCVAFTDNQRLIGDAAKNQAATNPTNTVFDVKRLIDRRYSDPAIQNDLMLWPFKVISGIDDKPMIVVKYKGQEKHISAEEISSMVLTKMRKIAEEYLESPVKNAVVTVPAYFNDSQRQATKDAERNIFIFDLGGGTFDVSLLTIKGDVFQVKATAGDTHLGGEDFDNRMVNNFVQEFKRKNKVDISGNPRALRRLRTACERAKRTLSFAVDTTIEVDALFESIDFCSSITRARFEELNMDLFRKCMETVERCINDSKMDKNNIHDVVFVGGSSRIPKVQQLIQDFFKGKDLCKSINPDEAVAYGAAVQAALLNKSNKFVPNLVLLDVTPLSLGIYETSGDFQSSVPIKVYEGERTRASDNNLLGLFDLCGIPSVPRGHPFNVFFDIDANGILKVSAEEETTGSRNQITITNDKGRPSTQEIMRDTKLKIRSTRRKLKR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00124 496 FunFam Heat shock cognate 70 kDa protein 2 303 350 - -
Sebi3g00124 496 FunFam Heat shock 70 kDa 219 302 - -
Sebi3g00124 496 Gene3D - 184 353 - -
Sebi3g00124 496 PANTHER HEAT SHOCK PROTEIN 70KDA 24 481 IPR013126 GO:0005524|GO:0140662
Sebi3g00124 496 ProSitePatterns Heat shock hsp70 proteins family signature 1. 26 33 IPR018181 -
Sebi3g00124 496 PRINTS 70kDa heat shock protein signature 193 203 - -
Sebi3g00124 496 PRINTS 70kDa heat shock protein signature 353 373 - -
Sebi3g00124 496 PRINTS 70kDa heat shock protein signature 52 64 - -
Sebi3g00124 496 PRINTS 70kDa heat shock protein signature 22 35 - -
Sebi3g00124 496 PRINTS 70kDa heat shock protein signature 74 82 - -
Sebi3g00124 496 PRINTS 70kDa heat shock protein signature 435 451 - -
Sebi3g00124 496 PRINTS 70kDa heat shock protein signature 321 337 - -
Sebi3g00124 496 PRINTS 70kDa heat shock protein signature 379 398 - -
Sebi3g00124 496 ProSitePatterns Heat shock hsp70 proteins family signature 2. 187 200 IPR018181 -
Sebi3g00124 496 Gene3D - 354 368 - -
Sebi3g00124 496 FunFam heat shock 70 kDa protein-like 87 142 - -
Sebi3g00124 496 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 370 495 IPR029047 -
Sebi3g00124 496 Pfam Hsp70 protein 181 397 IPR013126 GO:0005524|GO:0140662
Sebi3g00124 496 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 378 480 IPR029047 -
Sebi3g00124 496 ProSitePatterns Heat shock hsp70 proteins family signature 3. 324 338 IPR018181 -
Sebi3g00124 496 SUPERFAMILY Actin-like ATPase domain 181 370 IPR043129 -
Sebi3g00124 496 SUPERFAMILY Actin-like ATPase domain 22 183 IPR043129 -
Sebi3g00124 496 Gene3D Actin; Chain A, domain 4 219 302 - -
Sebi3g00124 496 Gene3D - 15 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00124 Sebi-Chr3 1797696 1799701 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00124 24 481 Calmodulin-binding Proteins AT3G12580 67.442 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00124 K03283 - jre:108992981 658.292