Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00101 ATGCTAGAGGCTTACCTTGGATCAAAAGTGAAGAATATTGTTATCACTGTACCTACTTACTTCAATGATTTTCAGCATCAAGCCACCAAAGATGCAGGTGCTATTGCAGGCCTCAATGTTATGCGAATAATCAATGAACCCACTGCTGCAGCGATTGCTTATCGCCTTGAAATGAAATATCATAGTCACAGAAGGAGAAATGCTTTTATATTTGATTTGGGAGGTGGTACTTTGGATGTGTCTCTTCTCACATTTGAGGAAGAAGATGAAATCCAAGTTAAGGCCATTGTTGGAGACACTCACCTTGGGAGACAAGATTTTGATAACATAATGGTAAGCTACTTTGTGAAAGAGTTTCAGAGGAAGAACAAAAAAATGGACATTAGTGGAGACCCAAGAGCCCTTAGGAGGTTGAAGTCTGCTTGTGAGAAAGCAAAGAAGATACTCTCTTCCAATACTGATACATGCATTGAGATAGATTGTTTATATCAAGGTGGCTCTACTAGGATTCCTAAAGTGCAGTAG 525 0.3943 MLEAYLGSKVKNIVITVPTYFNDFQHQATKDAGAIAGLNVMRIINEPTAAAIAYRLEMKYHSHRRRNAFIFDLGGGTLDVSLLTFEEEDEIQVKAIVGDTHLGRQDFDNIMVSYFVKEFQRKNKKMDISGDPRALRRLKSACEKAKKILSSNTDTCIEIDCLYQGGSTRIPKVQ 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00101 174 PANTHER HEAT SHOCK PROTEIN 70KDA 3 165 IPR013126 GO:0005524|GO:0140662
Sebi3g00101 174 FunFam heat shock 70 kDa protein 14 103 171 - -
Sebi3g00101 174 SUPERFAMILY Actin-like ATPase domain 2 57 IPR043129 -
Sebi3g00101 174 Gene3D - 2 58 - -
Sebi3g00101 174 FunFam Endoplasmic reticulum chaperone BiP 1 70 - -
Sebi3g00101 174 Gene3D Actin; Chain A, domain 4 103 166 - -
Sebi3g00101 174 SUPERFAMILY Actin-like ATPase domain 66 165 IPR043129 -
Sebi3g00101 174 PRINTS 70kDa heat shock protein signature 76 86 - -
Sebi3g00101 174 PRINTS 70kDa heat shock protein signature 13 33 - -
Sebi3g00101 174 Pfam Hsp70 protein 3 165 IPR013126 GO:0005524|GO:0140662
Sebi3g00101 174 ProSitePatterns Heat shock hsp70 proteins family signature 2. 70 83 IPR018181 -
Sebi3g00101 174 Gene3D - 59 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00101 Sebi-Chr3 1386616 1387286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00101 1 165 Calmodulin-binding Proteins AT3G09440 68.485 1.47e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00101 K03283 - gmx:100798636 231.491