Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00100 ATGATGCAAGACAAAGATAATAGGGATAATGTGTGTGAAGGTGAAACAGTAAATAATTTGAATTCCCCAAATGAAGATAATGTTTGTGCTGATGAGCTTGCTCCTGATGTGTACAAAAGGATTTCTGAGCTTACAGATGAGGATATTAGATTACTTGAGTTTGATTCTGAAAAAGATGGATATGAATTCTATAGTCAGTATGCTAAATTCAAAGGATTTGTTGTTAGGAAGGATGATGTTTATCGTAATCGCAATAACCTTATTACAATGAGGCAATTGGTATGTAACAGGCAGGGGGAAAGGAGTGAGAAGCATTTAAATAGGACAGATAGAGTTAGGGAAGCTAGGCCATTACTCGTACCAATTGTCTTGCAAGGCTTCGATTGTACTTAG 393 0.3639 MMQDKDNRDNVCEGETVNNLNSPNEDNVCADELAPDVYKRISELTDEDIRLLEFDSEKDGYEFYSQYAKFKGFVVRKDDVYRNRNNLITMRQLVCNRQGERSEKHLNRTDRVREARPLLVPIVLQGFDCT 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00100 130 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 113 - -
Sebi3g00100 130 MobiDBLite consensus disorder prediction 1 28 - -
Sebi3g00100 130 Pfam FAR1 DNA-binding domain 62 111 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00100 Sebi-Chr3 1344700 1345092 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi3g00100 FAR1 7.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00100 - - lja:Lj1g3v4467990.1 100.908