Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00099 ATGGCAGAAAAGGCAATAGGAATCGATCTAGGGACAACTTACTCTTGCGTTGCAGTGTGGAAACACGATCGCGTAGAGATCATTGTGAACGAGCAAGGGAACAGAACAACACCCTCTTATGTTGCATTCACTGACACCCAAAGGATGATTGGTGACGCCGCTGTGAACCAAGCTGATCGCAACCCAACCAACACTGTCTTTGATGCAAAGCGGTTAATAGGTAGGAGATTTAGCGAGTCCGTGGTTCAGAATGACATGAAGCTGTGGCCATTCAAAGTCATTGCTGATGTTAATGACAAACCCAAGGTTGTTGTTAATTACAATGGAGAGGAAAAGCAATTTGCTGCTGAGGAAATCTCATCCATGGTATTGGTAAAGATGCGTGAGATTGCAGAGACTTACCTTGGATCAAAAGTGAAGAATGTTGTTATCACTGTGCCTGCTTACTTCAATGACTCTCAGCGTCAAGCTACCAAAGATGCAGGTGTTATTGCAGGCCTCAATGTTATGCGCATAATCAATGAGCCTACTGCTGCAGCAATTGCTTATCGCCTTGAAATGAAATATGGCAATTGCAGAAGGAGAAATGTTTTCGTCTTTGATTTGGGAGGTGGTACTTTGGATGTTTCTCTTCTCACATTTGAGGAGGGTGATATCCAAGTTAAGGCCGTTGCTGGAGACACTCACCTTGGGGGACAAGACTTTGATAAGAGAATGGTGAACTACTTTGTGAAGGAATTCCAAAGGAAGAACAAAATGGACATTAGTGAAGATAAAAGAGCTCTTAGGAGGTTGAGATCTGCTTGTGAGAAAGCAAAGAGGATACTCTCGTCCACTTTTCAGACAACCATTGAGATAGATTGTTTATACCAAGGTGGCTCTACTAGGATTCCTAAAGTGCAACAACTATTGATGGACTTCTTTGTTGGAAAGGATCTTTGCAATAGCATCAATCCTGATGAGGCTGTTGCATATGGTGCTGCTGTCCATGCTTCTATAGTGAACGGTGAATTCAGTGAGAAGGTTCAAGACTTGTTACTTAGGGATGTCACCCCTCTGTCCCTTGGCTTAGAGACAAAAGGAGGTATCATGGAAATAATAATTCCTAGGAACAGTATCATTCATCCTACAAAGATGGAACATGTATTCACGACACATCTACATAACCAAAGAAATATCTTGATTCATGTTTATGAGGGTGAGAGACAAACAACTATGGATAACAACTTGCTAGGTAAATATGTACTGGAAATTCCTCCAGCTCCTCGTGGTGTTCCTCAAATCAAGGTCTGCTTTATAATTGATGATGATGGCATCTTACACGTCTCTGCCACTGAAAAATTCCATGGAATTAATAAGACGGTAACCATAATAAATGAGAAGGGAAGGTTGTCAAGTGAAGAAATTGAGAGGATGATCACAGAAGGTGAGAAGTACAAGGATGAAGATAAGAGGTACAAGAAGAAGGTTGATGCAAGGAATGCATTGGAGAAGTATGCATACAACATGAGGGGTGCTATAAACAACATGGAGGTTAGTTTGAAGCTTTCCCCTGAAGACAAGAAAAAGATCAACGAAGCAATTGATTCAGTTTTGTTGTGGCTTGATGGCAATGTGTTTGCAGAACGTGAAAATGTTGAGTATTATGGGAGTGTTCTTTCGAGTGTCTTTGATCCAATTATTCTGAAGATGATAAAGGATGAGGATAATGGTGTGCCTCCAGGTACTGTTGTTGGCCCTGTTGTTAATAATAAAAAGACTCACTGGTTATCAACATTAGCAAAATTGCTTTTCAGGCAGTGTATTCTACTGCTACGGGAAATATCGTTGGCTTTGCTTCTGATGTAA 1848 0.4113 MAEKAIGIDLGTTYSCVAVWKHDRVEIIVNEQGNRTTPSYVAFTDTQRMIGDAAVNQADRNPTNTVFDAKRLIGRRFSESVVQNDMKLWPFKVIADVNDKPKVVVNYNGEEKQFAAEEISSMVLVKMREIAETYLGSKVKNVVITVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYRLEMKYGNCRRRNVFVFDLGGGTLDVSLLTFEEGDIQVKAVAGDTHLGGQDFDKRMVNYFVKEFQRKNKMDISEDKRALRRLRSACEKAKRILSSTFQTTIEIDCLYQGGSTRIPKVQQLLMDFFVGKDLCNSINPDEAVAYGAAVHASIVNGEFSEKVQDLLLRDVTPLSLGLETKGGIMEIIIPRNSIIHPTKMEHVFTTHLHNQRNILIHVYEGERQTTMDNNLLGKYVLEIPPAPRGVPQIKVCFIIDDDGILHVSATEKFHGINKTVTIINEKGRLSSEEIERMITEGEKYKDEDKRYKKKVDARNALEKYAYNMRGAINNMEVSLKLSPEDKKKINEAIDSVLLWLDGNVFAERENVEYYGSVLSSVFDPIILKMIKDEDNGVPPGTVVGPVVNNKKTHWLSTLAKLLFRQCILLLREISLALLLM 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00099 615 Gene3D - 67 122 - -
Sebi3g00099 615 PRINTS 70kDa heat shock protein signature 4 17 - -
Sebi3g00099 615 PRINTS 70kDa heat shock protein signature 285 301 - -
Sebi3g00099 615 PRINTS 70kDa heat shock protein signature 425 441 - -
Sebi3g00099 615 PRINTS 70kDa heat shock protein signature 344 363 - -
Sebi3g00099 615 PRINTS 70kDa heat shock protein signature 32 44 - -
Sebi3g00099 615 PRINTS 70kDa heat shock protein signature 317 337 - -
Sebi3g00099 615 PRINTS 70kDa heat shock protein signature 54 62 - -
Sebi3g00099 615 FunFam Heat shock protein 70 6 194 - -
Sebi3g00099 615 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 491 568 IPR029048 -
Sebi3g00099 615 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 340 497 IPR029047 -
Sebi3g00099 615 Gene3D - 6 187 - -
Sebi3g00099 615 Gene3D - 493 584 IPR029048 -
Sebi3g00099 615 Pfam Hsp70 protein 5 287 IPR013126 GO:0005524|GO:0140662
Sebi3g00099 615 Pfam Hsp70 protein 292 532 IPR013126 GO:0005524|GO:0140662
Sebi3g00099 615 PANTHER HEAT SHOCK PROTEIN 70KDA 5 292 IPR013126 GO:0005524|GO:0140662
Sebi3g00099 615 SUPERFAMILY Actin-like ATPase domain 4 186 IPR043129 -
Sebi3g00099 615 ProSitePatterns Heat shock hsp70 proteins family signature 2. 199 212 IPR018181 -
Sebi3g00099 615 ProSitePatterns Heat shock hsp70 proteins family signature 1. 8 15 IPR018181 -
Sebi3g00099 615 Gene3D - 318 332 - -
Sebi3g00099 615 Gene3D - 292 317 - -
Sebi3g00099 615 FunFam Heat shock 70 kDa 231 308 - -
Sebi3g00099 615 SUPERFAMILY Actin-like ATPase domain 195 333 IPR043129 -
Sebi3g00099 615 FunFam Heat shock 70 kDa protein 338 493 - -
Sebi3g00099 615 Gene3D - 188 230 - -
Sebi3g00099 615 Gene3D Actin; Chain A, domain 4 231 291 - -
Sebi3g00099 615 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 339 492 IPR029047 -
Sebi3g00099 615 FunFam heat shock 70 kDa protein-like 67 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00099 Sebi-Chr3 1340502 1342756 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00099 5 564 Calmodulin-binding Proteins AT3G12580 64.039 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi3g00099 K03283 - gmx:100798636 790.801