Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi3g00088 ATGCCACGGGATGCAGGTTGCTTAGCTGACGAAAATGTTGGATATGAGAACTCTTCCAGAATTGAACCAAAGCGAAGTCATCAGTGGTTTATGGATACAGGTGAACCAGAAATATTCAGCAACAAGAAACAAGCAGTTGAAGCTGTTAATGACAGGCCAGTTTCACATGTGAATGTTTCTCAATGGGACACCAATTCGGGATTTCACTCAGTCACAGGCCAATTTTCTGACCGTCTCTTTGGATCTGATCTTGTACGGCCTGTCAATTTGGTTGATAAGAACATGCCATCAATTGGTAGTGGAAATCTGAACATGGGAAGGAAGGATTTGGGGAATCAATATGGTAATGATCCATCTGTGGGGCTGTCAATATCTCATACCATAGCAGACCCTTCATCATCTCTGAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAATTGCATGTCTGCTCCATCCATAGGGCACTCCTATAGTAGGGCTGATGATAGTACAATTTCAATAGGTGCTGGCTACAATAAGAATGATGGCAACATTTCATTGGGCCCAACTTATAACAATGAAAATGACAACACCGTTGCTATGGGGACTGGAATAAGTAAGACCGGTGACAACCTTGTTTCAGTGGGTCACACCTTCAATAAAGGGGATGGGAATTTTATGTTGATGGGCCACAATTATGGTAAGGGAGACAATAGTATCTTAACAATGGGTCAGCCCTTTGACAGGGGAGATGGAAATTTCATATCAATGGGTCAATCATATGAAAAAGAAGATGGCAATTTGATATCTCTGGGTATCTCATATACCAAGGGGCAAGAGAACTTTATATCAATGGGTCCAACCTATGGTAAATCAGGAGAAAATTTCATAACTGTTGCTCCTTCTTATGACAAGGGCACTGATCATGTAACATCAATGGGTCCAACATATGACAAGGTGGATTCAAACATTGCATCAACAGTTCCATCATATGACACGGGTGATTCTAGCCCTTTACCTGTGGGTCAAAACCACAATAAGGGTCTGAGCAGTACCATATCTTTTGGAGGTTTTCATAATGATTCTGAACCAAATCCCTCTGGTGGAATCATTAGTGGCTATGATATGTTGATGGGCAACCAGAACTCAGCTCAAGGCTTGGATAGCCAGAAGGATCTGACTGTGTCAAACCCTGAACCACTTGTAAATAACATTCCAAAACCTAATGCTAAAAATGACACTGTTAAGAACAAAGAGCCGAAGACAACCAAGAAGGCTCCTTCTAACAACTTCCCTTCAAATGTCAAAAGTTTGTTGTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAAGGAACCATAAAAGGAACTGGGTACTTGTGTTCGTGTGATGACTGCAAGCAGTCAAAGCCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCGAAGACAAAACACCCTAACAATCATATATACTTTGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAGCTGAAGAACACTCCTCAGGAGATGCTCTTTGATGCAATTCAAAATGTGACTGGCTCCAACATCAACCAAAAGAACTTTCGTATTTGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTACAGCGTATTTATGGGAAGGATGAAGTGGTCATACCATCTTGA 1710 0.4123 MPRDAGCLADENVGYENSSRIEPKRSHQWFMDTGEPEIFSNKKQAVEAVNDRPVSHVNVSQWDTNSGFHSVTGQFSDRLFGSDLVRPVNLVDKNMPSIGSGNLNMGRKDLGNQYGNDPSVGLSISHTIADPSSSLNFGGIRKVKVNQVRDSDNCMSAPSIGHSYSRADDSTISIGAGYNKNDGNISLGPTYNNENDNTVAMGTGISKTGDNLVSVGHTFNKGDGNFMLMGHNYGKGDNSILTMGQPFDRGDGNFISMGQSYEKEDGNLISLGISYTKGQENFISMGPTYGKSGENFITVAPSYDKGTDHVTSMGPTYDKVDSNIASTVPSYDTGDSSPLPVGQNHNKGLSSTISFGGFHNDSEPNPSGGIISGYDMLMGNQNSAQGLDSQKDLTVSNPEPLVNNIPKPNAKNDTVKNKEPKTTKKAPSNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGTIKGTGYLCSCDDCKQSKPLNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSNINQKNFRIWKASYQAATRELQRIYGKDEVVIPS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi3g00088 569 MobiDBLite consensus disorder prediction 352 374 - -
Sebi3g00088 569 PANTHER AUTOIMMUNE REGULATOR 5 509 - -
Sebi3g00088 569 MobiDBLite consensus disorder prediction 396 411 - -
Sebi3g00088 569 SUPERFAMILY Porins 123 327 - -
Sebi3g00088 569 Pfam Tify domain binding domain 462 517 IPR032308 -
Sebi3g00088 569 MobiDBLite consensus disorder prediction 352 367 - -
Sebi3g00088 569 MobiDBLite consensus disorder prediction 396 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi3g00088 Sebi-Chr3 1246369 1248362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi3g00088 421 550 PHD Transcription Factor Family AT3G53680 55.385 2.38e-40 155