LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi39g00014	ATGGATGATCATGTTTCAATTCAGGGTTCTTTACAATTTGGAACATTTCAGAGTAATGAAGTGCATACAGGATTGGATGTTACTTGTTCAGAATCCTCTTCATTTAGTGATATGGGTAATTCAGAAAATGGACGTGATAATGAAGAAATAGAGACACCAATAATTGTGACTAAGGAGCAAGATCAATATGAGCCAAAAATTGGTATGATATTATCAAATGAAGATGAAGCTTATAAATTCTATAATGAGTATGCTAAATTCATCGGGTTTACTGTGAGAAGAAACCAATATCGAAGATTGGCAGATGGAACTTTAAGGCAAAGGACATTTGTTTGTGGAAGAGAGGGGCATAGAAAGCCAAAGGACCCTTCACATGTGAGCAAGATTAATAGGAAAGAAACAAGAACTGGTTGTCCAGCCATGATATGCTTTACCATTGAAAAGGATACTTGGATTGTTTCTAAATTCATTTCTGATCATAATCATGATCTAGAGAACTCTTCTGTTCGGGCTATGTTACGATCACAAAGACATGTAGATGAAGCACATGCTAATATAATTGAAGTTATGGACAATGCTGGTATCAAACCGTGTGGTATGTATTCATATTTTGTTGAAGCTGCTGGAGGAGTCCAAAATGTTGGGTGCCTCTACAATTGTGAATCAGAGAAAGAGTTTGAAGAAACAATGTCTCTTACTCAATTCATACTCCGTTATGAGAAGGTCTTGGAGCGCAGACGCTGGTCAGAATTGCAAAAGGACTTTGAATGCAATCAATCTGCACCTCCTAGAGTTAAGAAACTTACAGCATCAAGTACAGGAGCAAAGGATTTAAGCACCACTTCTACTCCTGCATCAACATTTTATTTTTCACACATCTCTCAAGTGGCAAGTGCTAGCTCATCTCAGGTGGCTAATAAGAATCATATTAGCAATAATATTTTACTCAGTTTTCCATATACACAGCTATCTTCTGGAAGTACCATGGGCCAAGAGAAACCATGA	1005	0.3721	MDDHVSIQGSLQFGTFQSNEVHTGLDVTCSESSSFSDMGNSENGRDNEEIETPIIVTKEQDQYEPKIGMILSNEDEAYKFYNEYAKFIGFTVRRNQYRRLADGTLRQRTFVCGREGHRKPKDPSHVSKINRKETRTGCPAMICFTIEKDTWIVSKFISDHNHDLENSSVRAMLRSQRHVDEAHANIIEVMDNAGIKPCGMYSYFVEAAGGVQNVGCLYNCESEKEFEETMSLTQFILRYEKVLERRRWSELQKDFECNQSAPPRVKKLTASSTGAKDLSTTSTPASTFYFSHISQVASASSSQVANKNHISNNILLSFPYTQLSSGSTMGQEKP	334

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi39g00014	334	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	18	213	-	-
	Sebi39g00014	334	Pfam	FAR1 DNA-binding domain	79	164	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi39g00014	Sebi-Chr39	781840	784782	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi39g00014		FAR1	3.1e-23	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi39g00014	-		-	qsa:O6P43_013811	200.29