Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi39g00009 ATGGCTACCCCAGAGTCCAATTTGCCACCAGGTTTTAGGTTCCACCCAACTGATGAGGAGCTCATTCTTCATTACCTCAGAAAAAAAATTGCCTCCATACCCTTACCAGTTTCCATCATTGCTGAGGTTGATATCTACAAGCTTGATCCATGGGAATTACCAGCAAAGGCTACATTTGGGGAGAAAGAATGGTATTTTTTCAGTCCTAGAGACAGGAAGTACCCAAATGGTGCAAGGCCAAACAGAGCAGCTGCTTCAGGGTATTGGAAGGCCACTGGCACAGATAAGACCATAGTGACATCATTACCAAGAGGAGGGGCCAAAGAGCACATTGGTGTGAAGAAGGCTTTGGTATTTTACAAAGGAAAACCTCCAAAAGGTGTCAAGACCAATTGGATCATGCATGAATATCGCCTCGTAGACAACAACAAACCCATTAAGCTCAAAGATTCCTCCATGAGGTTGGATGATTGGGTACTGTGCCGGATTTACAAGAAGTCCAAATACACTCTACCTTCAACAGAGGCAGCTACAGGGGTAGGTGAGGTAGAAGAACACCAATTCAAAGATACCCTTTGGCCAATCTCAAAATCTCCAACACCTCCTCCTCAGAACACACTGATATCTCAGAAATCTGTGTCCTTTTCCAACCTATTGGATGCCATGGACTATTCCATGCTGAGTAGCTTCTTATCTGAGAACCATTCCAACACACCAGGGATTGGAATTGGATCAAGTGCAGGATTCAACAGTGGGATCAATTTGGATCAGCAACCTTCTCAAATTAACACCAGCAATTTTCACATTTTTCAGAAGAATCCCCAATTGAACCCTTCAGTCACCAACATGGAAAACATTAGGCCAAAGCGCCAGCTTTCAAACATGGATCATGAGGACACTTTGTACCCATCAAAGAAATACATGAGTTCTTCTTGCAACTTCCCAACTAACATCAATGCCCAATTTGAGAACCCACAATGGAACTACCTCATGAAGCAGTCTTTGTTGACTCAGCAGTTACTCCTGGGTCCTCATCTTCAATTTCAAGGATAA 1053 0.4349 MATPESNLPPGFRFHPTDEELILHYLRKKIASIPLPVSIIAEVDIYKLDPWELPAKATFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLPRGGAKEHIGVKKALVFYKGKPPKGVKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKYTLPSTEAATGVGEVEEHQFKDTLWPISKSPTPPPQNTLISQKSVSFSNLLDAMDYSMLSSFLSENHSNTPGIGIGSSAGFNSGINLDQQPSQINTSNFHIFQKNPQLNPSVTNMENIRPKRQLSNMDHEDTLYPSKKYMSSSCNFPTNINAQFENPQWNYLMKQSLLTQQLLLGPHLQFQG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi39g00009 350 PANTHER NAC TRANSCRIPTION FACTOR 56 8 189 - -
Sebi39g00009 350 SUPERFAMILY NAC domain 3 166 IPR036093 GO:0003677|GO:0006355
Sebi39g00009 350 ProSiteProfiles NAC domain profile. 8 166 IPR003441 GO:0003677|GO:0006355
Sebi39g00009 350 Gene3D NAC domain 17 170 IPR036093 GO:0003677|GO:0006355
Sebi39g00009 350 FunFam NAC transcription factor 56 17 171 - -
Sebi39g00009 350 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi39g00009 Sebi-Chr39 644492 645770 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi39g00009 4 350 NAC Transcription Factor Family AT3G04070 52.676 3.82e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi39g00009 NAM 2.3e-40 No_clan