Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi39g00007 ATGGACTTCTTAACACTCATCACTTTTGCACTCTTGTTAATGCCTGCAATCTCTTCTTCCCAGTATCTTAGGAACAACATACTACTCAGTAACCGTAAGATATTACCCAAACAGGAAAACAATATTACCTCTTACGCTGTGATATTTGATGCGGGTAGCACTGGCAGTCGTGTGCATGTCTTCCATTTTGACCAGAACTTAGATCTCCTTCAAATTGGCGAAGATCTTGAGTTTTATGATAAGGTCACACCCGGTTTGAGTTCATACGCAGATAATCCTGAAGAAGCCGCAGAGTCTCTTATTCCTCTTTTAGAGGAAGCAGAAAATGTGGTCCCTGACGACATGTACTCCAAGACACCCGTTAGGCTTGGGGCAACTGCAGGATTAAGGCTTTTGGATGGGAATGCTTCTGAACTGATACTGCAAGCGGTTAGGGATATGCTCAGCAACAGAAGTACATTCAACGTTCAATCTGATGCAGTATCTATTCTTGATGGAACCCAAGAAGGTTCTTATCTGTGGGTGACAATTAATTATCTTTTGGGGAAGTTGGGAAAAAGCTATTCACAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGACATATGCTGTCTCAAGAAACACAGCTAAAAATGCTCCAATTGTTCCAGATGGAGAGGATCCATACATAAAGAAAGTTGTACTCAAGGGAAAGCAATATAATCTCTATGTTCACAGTTACTTGCACTTTGGCAAAGAAGCATCTCGTGCAGAGATGTTGAAGGTCACTAATGGTTCTGCTAACCCTTGCATTTTAGGTGGCTATGATGGTACCTATACATATTCCAAGGTGGAGTATAAGGCCTCATCCCCTGCATCAGGCTCCAACTTTGAAGAATGCAGAGAGATAGTTCTTAAGGCTCTCAAAGTGAATGAGCCATGTCCCTATTCAAATTGCACTTTTGGTGGGATATGGAAAGGTGGAGGAGGAAATGGACAGAAAAAGCTTTATGTCACTTCGTCTTTCTATTACGTGCCCATGGATGCTGGTATTGTTGATTCTGACAAACCCAACTCCAAAATTCGTATTAAGGATCTGAAGAGTGAAGCTGAGCGAGCTTGTCAAATAAAATTTGAGGATGCAAACTCCACTTATCCACTTTTTGATGAGTCGAGTCTTCCTTATATATGCATGGATCTTACCTATCAGTATACGTTGTATGTTGATGGATTTGGCCTAGATCCATTGCAAAAGATTACAGTGACAAAGGAAATTGAATATGAGGGTGCTGTTGTGGATGCAGCATGGCCTATGGGCAATGCAATAGAAGCCATATCATCATTGTCTACATTTAAGCTATTAATGTATTTTATTTAG 1368 0.4101 MDFLTLITFALLLMPAISSSQYLRNNILLSNRKILPKQENNITSYAVIFDAGSTGSRVHVFHFDQNLDLLQIGEDLEFYDKVTPGLSSYADNPEEAAESLIPLLEEAENVVPDDMYSKTPVRLGATAGLRLLDGNASELILQAVRDMLSNRSTFNVQSDAVSILDGTQEGSYLWVTINYLLGKLGKSYSQTVGVVDLGGGSVQMTYAVSRNTAKNAPIVPDGEDPYIKKVVLKGKQYNLYVHSYLHFGKEASRAEMLKVTNGSANPCILGGYDGTYTYSKVEYKASSPASGSNFEECREIVLKALKVNEPCPYSNCTFGGIWKGGGGNGQKKLYVTSSFYYVPMDAGIVDSDKPNSKIRIKDLKSEAERACQIKFEDANSTYPLFDESSLPYICMDLTYQYTLYVDGFGLDPLQKITVTKEIEYEGAVVDAAWPMGNAIEAISSLSTFKLLMYFI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi39g00007 455 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 164 179 IPR000407 GO:0016787
Sebi39g00007 455 CDD NBD_sugar-kinase_HSP70_actin 47 206 - -
Sebi39g00007 455 Gene3D Exopolyphosphatase. Domain 2 165 423 - -
Sebi39g00007 455 FunFam Apyrase 1 165 423 - -
Sebi39g00007 455 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 45 174 - -
Sebi39g00007 455 Pfam GDA1/CD39 (nucleoside phosphatase) family 39 445 IPR000407 GO:0016787
Sebi39g00007 455 Gene3D - 45 439 - -
Sebi39g00007 455 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 10 444 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi39g00007 Sebi-Chr39 525188 530295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi39g00007 44 444 Calmodulin-binding Proteins AT3G04080 54.975 2.66e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi39g00007 K14641 - gmx:100781628 675.241