Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi399g00040 ATGGGGAAAGAAGAATCCAATAGAACCAATAAATTTGGTACACCTTACAAATTTATGGTGCCTCAAGATGTGACTCATGAAACTCTAAACAAACCTATTCAACCACTTTGGACTACTTCTATGCAGGCACATTACAATCCTGGGTTACCTACAATTCCCATTTTAAATCCACATGCTGCCAATTCATACTTGCATCGCTATGTGTTGCCAAATCAGGCAAATAGCACACTACTTCAACGTGATGCTCCGCATGACCCCAGCAAGCTTTCCAATAAAATTCCACCAGTTAAGGATGCTGCATTGGCTTTTTCGGAAATGGTACACAAGACTTTCGGTGAAAAAAGCCAGTGTTCGATGGAAAGAATTGCCAGAACCTTACAACCTGAAAATTTAATGTTCGGGGAAGCAAGAAAAAATGGAAGTGGATCTTCAATACCAAAAAATGACACTGATGGAATGTCAAGGAGTGCAGCAACTGGAAACAAGGGATCACCAGATGAAACACATGACACTAACAATGATTTTCCTTCAACCAAAGAGGATCAATCTAATATAATGCTTGGAAATGAAAATTCAACCCTTAATCAGAATTCGGAAACAGGTCTCAATGCATCTGGCACTACTGCTTGCCTCACAGAGCTGGATGATGAGGATGAAATAAGAAGAGAGAGAAAAAGACAATCAAACAGGGAATCGGCTAAGAGATCAAAGCTACGGAAACTGCGCGAATGTAAAGAGCTACATAAAGACTGGGACACTCTTAAGGATGAAAACTCCTTGCTTACACAAGAGCTCAAAATGCTTTCTGAGGAATGTCTGGAGCTCAGCAATGAAAACGATGCCATACAGATCCATACTAAAGAGAGTAGTCGTTATGTTGTTGTGAGGTTAGGAGGAGTCCAAAAGCTAAGGAACATCCAAGAGAAAAACCAACAATAA 939 0.4026 MGKEESNRTNKFGTPYKFMVPQDVTHETLNKPIQPLWTTSMQAHYNPGLPTIPILNPHAANSYLHRYVLPNQANSTLLQRDAPHDPSKLSNKIPPVKDAALAFSEMVHKTFGEKSQCSMERIARTLQPENLMFGEARKNGSGSSIPKNDTDGMSRSAATGNKGSPDETHDTNNDFPSTKEDQSNIMLGNENSTLNQNSETGLNASGTTACLTELDDEDEIRRERKRQSNRESAKRSKLRKLRECKELHKDWDTLKDENSLLTQELKMLSEECLELSNENDAIQIHTKESSRYVVVRLGGVQKLRNIQEKNQQ 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi399g00040 312 MobiDBLite consensus disorder prediction 177 210 - -
Sebi399g00040 312 MobiDBLite consensus disorder prediction 218 237 - -
Sebi399g00040 312 Coils Coil 251 278 - -
Sebi399g00040 312 PANTHER G-BOX-BINDING FACTOR 3-RELATED 32 286 IPR044827 GO:0003700|GO:0006355|GO:0043565
Sebi399g00040 312 SMART brlzneu 217 281 IPR004827 GO:0003700|GO:0006355
Sebi399g00040 312 SUPERFAMILY Leucine zipper domain 220 276 IPR046347 GO:0003700|GO:0006355
Sebi399g00040 312 CDD bZIP_plant_GBF1 222 272 IPR045314 GO:0003700|GO:0006355
Sebi399g00040 312 MobiDBLite consensus disorder prediction 141 166 - -
Sebi399g00040 312 Gene3D - 216 279 - -
Sebi399g00040 312 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 219 282 IPR004827 GO:0003700|GO:0006355
Sebi399g00040 312 MobiDBLite consensus disorder prediction 128 210 - -
Sebi399g00040 312 Pfam bZIP transcription factor 217 279 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi399g00040 15 283 bZIP Transcription Factor Family AT4G36730 27.178 9.94e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi399g00040 bZIP_1 1.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi399g00040 K09060 - gmx:102665715 284.263