Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi399g00005 ATGGAAGCTAAATTTCAGATTATGTCAACACAAGTCATAAAGCCCTTTACTACAACCCCTCATCATCTCAAACACTTCAATCTCTCATTTCTTGATCAAATCTCACCATATCAATACACTTCAGTTCTATTCTTCTACTCTGCATCCAATGTCAGTAGTGATGACACTAACTTTACATCCCTATGTGATAATCTGAAGGCTTCTTTATCAAATGTGTTAACCCTTTACTACCCACTTTGTGGAAGAATCAAAGCAAATGCCTACATTGATTGTAATGATGCAGGTGTGCCTTTTATTGAGGCTAGAGTTTCCTCCCATCTCTCTTCCATCCTAGAATACCCACAGGTCAATATCTTGAAACAATTACTTCCACTTGATCCATATGAACCAGTATTTGAAAATGTTAACTATGAGGAACTAGTCATGATGGCGGTTAAATTTAGCAAACTAAGTTGTGGTGGTGTAGTACTTGGTGTTTGCATGTCACATAAGATTATTGATGGTATAGGGATGACTTCTTTCTTTAATGCTTGGGTTGAAACAACAAAGGTAAGTGGCAACCCAACAAAACCTTGCATGGAAGCAAGTTTGTTATTTCCCACAAAAGACATGCATTTTACTACTCTTTCAGCTGGTATTGTTGAAAGCAAAGAACTTGTGATTGCAAGATTAGTGTTTGATGGGACAAGCTTGTCTAGGCTAAGAGATGAAATTGATGGCTATAGTCCCACTAGGGTTGAAGTTGTGACCGCTCTTATATGGAAATCAATGATGGATGCAACCATAGGAAGTTCGAGGGGGAAAAAACCTATAAGGTCTTTTGCATCACATGTTGTGAATATTCGTGGTCGCTTGGTGCCACCATTTCCAGAGAATAGCATAGGAAATGTTATTCAATTAGCTGTGACTCCATTGGTTGAAATGAATGTGGAAAAAAATGTTGGGTTGAAAGATTTGGTAGCAATGGTTAAGAAAGCAATAGTGGGACTTGATGTAGATTATGTGAGTAAACTTGGAAGTGATGTTGGGTTTGATAGGTTTATGGAGTTTAGAAAGAAATTGAAGTTTATGGTCTCCGAAGACATTCAATGGTCTAAGTTTTCTAGTTGGACAAGATTTCCTTTATATGAAGTTGATTTTGGATGGGGAAAGCCAACTTGGGTGAGTACTACTATTTTTCCTATAAGAGATAATGTCATGTTGTTGCCCACAAGATGTGGGGAAGGGATAGAGGCATGGGTGACCTTGGATAAGGAGGTTATGGTTCAATTTGAAAGCAATGAAAAGCTTCTACAACATGCATTGGTCTCACGTGCTTCTTGA 1323 0.381 MEAKFQIMSTQVIKPFTTTPHHLKHFNLSFLDQISPYQYTSVLFFYSASNVSSDDTNFTSLCDNLKASLSNVLTLYYPLCGRIKANAYIDCNDAGVPFIEARVSSHLSSILEYPQVNILKQLLPLDPYEPVFENVNYEELVMMAVKFSKLSCGGVVLGVCMSHKIIDGIGMTSFFNAWVETTKVSGNPTKPCMEASLLFPTKDMHFTTLSAGIVESKELVIARLVFDGTSLSRLRDEIDGYSPTRVEVVTALIWKSMMDATIGSSRGKKPIRSFASHVVNIRGRLVPPFPENSIGNVIQLAVTPLVEMNVEKNVGLKDLVAMVKKAIVGLDVDYVSKLGSDVGFDRFMEFRKKLKFMVSEDIQWSKFSSWTRFPLYEVDFGWGKPTWVSTTIFPIRDNVMLLPTRCGEGIEAWVTLDKEVMVQFESNEKLLQHALVSRAS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi399g00005 440 Gene3D - 2 208 IPR023213 -
Sebi399g00005 440 Gene3D - 217 436 IPR023213 -
Sebi399g00005 440 PANTHER F21J9.9 6 432 - -
Sebi399g00005 440 Pfam Transferase family 4 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi399g00005 Sebi-Chr399 95000 96322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi399g00005 4 425 Monolignol Biosynthesis Gene Families AT5G48930 24.222 1.16e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi399g00005 - K13065 cave:132178476 346.665