Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi399g00004 ATGTCAAGTCAAGTTATAAAGCCATCTTTTACAACCCCTCATCATCTCAAGTACTTCAAACTCTCATTTCTTGAACAAATTTCACCATATCAATACGTTTCAGTTCTCTTCTTTTACTCTGCATCTGATGTCAGTGGTTACGAAACTGGCTCTACATCCCTGTGTGATCATTTGAAGGCTTCTTTATCAAATGTGTTAAACCTTTACTACCCACTTTGTGGAAGAATCAAAGGAAATGCCTACATTGACTGTAGTGATGCAGGTGTGCCTTTCATTGAGGCTAAAGTTTCCTCCCATCTCTCTTCCATCCTAGAATACCCACAGGTCAATATCTTGAAACAATTACTTCCACTTGATCCATATGAACCAGTATTTGAAAATGTTAACTATGAGGAACTAGTCATATTGGCAGTTAAATTTAGCAAACTAAGTTGTGGTGGTGTAGTACTTGGTGTTTGCATGTCACACAAGATTGTTGATGGTATAGGGATGACTTCTTTCCTCAATGCTTGGGTTGAAACAATGAAGGTAAGTGGCAACCCAAAAAAACCTTACATGGAAGCAAGTTCATTATTTCCTACGAAAGACGTGCATTTTATTACTCTACCATCTGGTATGGTTGAAAACAAGGAACTTGTAACTGCAAGATTAGTGTTTGATGGGGAAAGCTTGTCTAGGCTAAGAGACGAAAATAATAGCTATCGTCCCACTAGGGTTGAAGTTGTGACGGCTCTTATATGGAAATCAATGATGGAGGCAACCATAGGGTGCTCGAGGGGGGGGAAACTTGTAAGGTCTTTTGCATCACATGTTGTGAATATTCGTAGTCGTATGGTGCCACCATTGCCAGAGAACAGCATAGGAAATGTTGTTCATTTTGTTGTGACACCATTAGTTGAATTCGAAGTGGACAAAAGTGTTGGGTTGCAAGATTTGGCAGTAATGGTTAAGAAAGAGATAAGGAGACTTGATGCAGATTATGTGAGTAAACTTGGAGATGATGGCGGGTTTGATTGGATTATGGAGTCTAGAGAGAAATTGAAGCTTATGATCTCTAAGGACATTCAATGGTCTAAGTTTTCTAGTTGGACAAGATTTCCTTTATATGAAATTGATTTTGGATGGGGAAAGCCAACTTGGGCGAGTAGTCTTTGTTTTCCTTCAAGAGATAATGTCAAATTGTTGCCCACAAGATGTGGGAAAGGGATAGAGGCATGGGTTATCTTGGATAAAGAGGTTATGGTTCAATTTGAGCGTAACCAAAAGCTTCTACAATATGCATCGATCTTACGTGCCTCTTGA 1302 0.3925 MSSQVIKPSFTTPHHLKYFKLSFLEQISPYQYVSVLFFYSASDVSGYETGSTSLCDHLKASLSNVLNLYYPLCGRIKGNAYIDCSDAGVPFIEAKVSSHLSSILEYPQVNILKQLLPLDPYEPVFENVNYEELVILAVKFSKLSCGGVVLGVCMSHKIVDGIGMTSFLNAWVETMKVSGNPKKPYMEASSLFPTKDVHFITLPSGMVENKELVTARLVFDGESLSRLRDENNSYRPTRVEVVTALIWKSMMEATIGCSRGGKLVRSFASHVVNIRSRMVPPLPENSIGNVVHFVVTPLVEFEVDKSVGLQDLAVMVKKEIRRLDADYVSKLGDDGGFDWIMESREKLKLMISKDIQWSKFSSWTRFPLYEIDFGWGKPTWASSLCFPSRDNVKLLPTRCGKGIEAWVILDKEVMVQFERNQKLLQYASILRAS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi399g00004 433 Pfam Transferase family 1 423 - -
Sebi399g00004 433 Gene3D - 1 199 IPR023213 -
Sebi399g00004 433 Gene3D - 209 428 IPR023213 -
Sebi399g00004 433 PANTHER F21J9.9 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi399g00004 Sebi-Chr399 79558 80859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi399g00004 3 419 Monolignol Biosynthesis Gene Families AT5G48930 24.609 1.81e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi399g00004 - K13065 egr:104439641 353.984