Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi398g00041 ATGTCAATGTTGGATCTCAATGTTGACATTATCCATGCTGGTGCTGACTCAACCTGTGCTCAAAAGGGGTTGCTACTGCAAAGTTTCCCACCTGAAATATCAGATTCTAAGACCTCCAACTCCTCAGTTTGGAATCCTGCAGAGGAAGATTCCTCAAACAATTCTTCTCCCTTCATATTTGACATATTGAAGAAAGGAAGAGATGGCTCAGAATTTCATACCACTGAAAGGGTCAAAGAAGAATACGTGGCACAAGAGCCAGAGAATGTCACAAGGACCCTTTTCCCTGTGATTGCTGATAAAGGAGGTAGAGTGTCTGATTCAAAGTTGGGGTTGTGGGGGAAGACTCAATGGCTGAACTTGTCCATTCCTGAGCCTGATGCACAAAATGGAGTGAGAACCTTGCAGCAGAAGCAACCTCAAGTTAGAAAAAGTAGGAGAGGACCAAGGTCTCGCAGCTCACACTATAGGGGTGTTACCTTCTACCGCAGGACTGGTGGATTTGACACTGCTCATGCTGCTGCAAGAGCGTATGATAGGGCTGCTATTAAGTTTAGGGGAGTTGATGCTGATATAAACTTTAGTTTGAGTGATTATGAGGAAGATTTGAAGCAGATGAAAGGTTTGAGTAAGGAAGAATTTGTCCTCATGATTCGTCGACAAACCAATGGAATCTTGAGGAGAAGTTCAGCATACAGAGGTGGATTAGCTCTTCACAAATATGGCCAAGGAGCAAGAATGGGACCATTTGTTAGCAAAAC 761 0.4376 MSMLDLNVDIIHAGADSTCAQKGLLLQSFPPEISDSKTSNSSVWNPAEEDSSNNSSPFIFDILKKGRDGSEFHTTERVKEEYVAQEPENVTRTLFPVIADKGGRVSDSKLGLWGKTQWLNLSIPEPDAQNGVRTLQQKQPQVRKSRRGPRSRSSHYRGVTFYRRTGGFDTAHAAARAYDRAAIKFRGVDADINFSLSDYEEDLKQMKGLSKEEFVLMIRRQTNGILRRSSAYRGGLALHKYGQGARMGPFVSKT 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi398g00041 254 Gene3D AP2/ERF domain 142 197 IPR036955 GO:0003700|GO:0006355
Sebi398g00041 254 MobiDBLite consensus disorder prediction 125 142 - -
Sebi398g00041 254 MobiDBLite consensus disorder prediction 31 56 - -
Sebi398g00041 254 SMART rav1_2 155 201 IPR001471 GO:0003700|GO:0006355
Sebi398g00041 254 ProSiteProfiles AP2/ERF domain profile. 128 195 IPR001471 GO:0003700|GO:0006355
Sebi398g00041 254 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 122 251 - -
Sebi398g00041 254 MobiDBLite consensus disorder prediction 125 156 - -
Sebi398g00041 254 SUPERFAMILY DNA-binding domain 155 196 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi398g00041 Sebi-Chr398 898647 900115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi398g00041 3 253 AP2-EREBP Transcription Factor Family AT2G28550 45.714 3.12e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi398g00041 K09284 - gmx:100776138 350.517