Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi398g00025 ATGCCGGGCATTCCTGTCGTGGCTCGTGCAACCTCATGCCATCCTGATGCTTGTGAGCATTTATCTGCGGAAGAGGGGCATGGTGCAGATGAGAGTCTTTCAATTTATTGCAAGCCTGTAGAGCTCTACAACATTCTTCAGCGACGTGCTATAAGAAATCCATCATTCCTTCAGAGATGTTTGCACTACAAGATACAGGCTAAGCACAAGAGAAGAATACAAATGACAGTTTCTCTGTCACGGACTGTTACTGAAAGCCAGACTGTGTTTCCATTGTATATCTGTCTGGCTAGGCTGATTTCTGATCTTGGAGTTCCAGAGTATTCTGCTGTGTATCGAATCAGTCGGATTTTCATCTTTCGAAATTCCCCTGGAATTGATTCGAACACTCAAGTCCAAGCAAAATTTACTCTTCCTGAAGTCAATAAGTTAGCTGTGGAAGCTAGATCTCGTTCACTTGCTGTCTTGTTTGTCAGCACCGTGGAAAACTCAAATTTATCATCTGGAGTCAATGCTAACTTGACGCCTTCGGATCTGCCTTCTTTTGAATCAAGAGCTGGAGAATATTGCTTATGCGGGAAAGTATCTTTAGAATCACTTTATATGGCTTGGGACAGTTCTCCAAATTTTCATTTGGGACAGCGAGCTGAGATCATGTCAACTGTGGATTTGCTTCCGTGCATTCTGAAGTCAGATTTTCAAAATGAGGACACAAGAGTCTCCATTCAAGTTCCCTGTAATTTGGAGAATGTGGGTACATCAAAGCAAGTACAAATCACAATTTCCGCAGAAGAGTTTGGTGCAAAAGAAAAATCTCCCTATCATTCATATGCAGGCAGTGAAGTACCACCATCATCATTAACTCGTATCATGCGGTTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTGCAATAATAAGTTGCAGAGAACAGAAGTCACGGAAGATTTCTCCTGTCCGTTCTGTTTGGTTAGGTGTGCTAGCTTTAAGGGTCTAAGATATCACTTGACCTCATCACATGATCTCTTCAACTTTGAATTTTGGGTATCGGATGAATGTCAGGCCGTAAATGTGTCTGTGAAAACTGATATCTGGAGATTTGAGATTGTTGCAGATGGCATTGATCCAAAATTACAAACATTTTTCTTTTGTGCAAAGCCCCTTAGGCGCAGAAGACCAAAGAACCTATCTTTGAAAAATGCTAAGGATGCACATCAATCGGTCTTAGAGTCTGACTTTCCTGCAGGGGACACTAATATTTTGGAGAAGGATGATGGGATTTCTACCACAAATGTTCTATCACATCCTGACTCAGACTGTGTCCAATCAATATCTGAATATGATCTTGGCACTCCTGCTGTGCTTCAGTTTGCCAAGACAAGAAAGTTATCAATGGAGCGTTCTGACCCACGAAACTGCGTCCTCTTAAGGAAGCGACAGTTTTTTCACTCTCACAGAGCCCAGCCAATGGCAATTGAACAAGTTCTATCAGATCAAGATAGTGAGGATGAAGTTGATGATGATGTTGCAGATTTTGAAGATCGAAGGATGCTTGACAATTTTGTTGATGTGAGCAAAGTTGAGAAGCGAGTAATGCATCTTTGGAACTCCTTTGTGCGGAAGCAACGTGTGCTAGCAGATGGTCACATTCCATGGGCATGTGAGGCTTTCACAAAATTGCATGCCCCTGAGCTTTCCCAATCCAGCTCATTGGCAAGGTAA 1725 0.422 MPGIPVVARATSCHPDACEHLSAEEGHGADESLSIYCKPVELYNILQRRAIRNPSFLQRCLHYKIQAKHKRRIQMTVSLSRTVTESQTVFPLYICLARLISDLGVPEYSAVYRISRIFIFRNSPGIDSNTQVQAKFTLPEVNKLAVEARSRSLAVLFVSTVENSNLSSGVNANLTPSDLPSFESRAGEYCLCGKVSLESLYMAWDSSPNFHLGQRAEIMSTVDLLPCILKSDFQNEDTRVSIQVPCNLENVGTSKQVQITISAEEFGAKEKSPYHSYAGSEVPPSSLTRIMRLREGNVMFNYRYCNNKLQRTEVTEDFSCPFCLVRCASFKGLRYHLTSSHDLFNFEFWVSDECQAVNVSVKTDIWRFEIVADGIDPKLQTFFFCAKPLRRRRPKNLSLKNAKDAHQSVLESDFPAGDTNILEKDDGISTTNVLSHPDSDCVQSISEYDLGTPAVLQFAKTRKLSMERSDPRNCVLLRKRQFFHSHRAQPMAIEQVLSDQDSEDEVDDDVADFEDRRMLDNFVDVSKVEKRVMHLWNSFVRKQRVLADGHIPWACEAFTKLHAPELSQSSSLAR 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi398g00025 574 CDD VEFS-box_EMF2-like 477 574 - -
Sebi398g00025 574 PANTHER POLYCOMB GROUP PROTEIN 20 573 - -
Sebi398g00025 574 Pfam VEFS-Box of polycomb protein 464 573 IPR019135 -
Sebi398g00025 574 CDD ZnB-Zn_EMF2-like 292 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi398g00025 Sebi-Chr398 525216 543675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi398g00025 1 572 C2H2 Transcription Factor Family AT5G51230 55.519 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi398g00025 - - gmx:100798991 855.899