Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi398g00005 ATGGGAAAGAAAACACTGAAGCTTCCATCACTGTTCAAAACCAAGGAATCACCACCACCACTGCTAAGAAAGCATCCATGGCAGTTATTTCCCTCTTTTAGCCAACGAAGAAATTTAAAGAGTACCCTCTCTTCCGATGATCTTGTCTTCCCTGACCCCACAGATGATGATGATGAAAACTACCGCTATGGGGAGTCCTTGGAGATGTTCGTATCACGTGGCGTGAGGTCAGAGAGACTCTTTTTCGAGCCTGGTGGCAACACCACAAGCTCGATCTTGGAGAAGGCTAAGGCTGATCATAATGGTAATGGTGGGTTTCCATTGGAAGAAAATGGTGTGGTGTTGTTGGCTATGGAGTCAGAGGATCCATGTGGGGACTTTAGGAGGTCAATGGAGGAGATGGTGGAGAGTCATGGAGTGAAAGGTTGGAAAGGCTTGGAGGAGCTTTTGAGTTGGTATTTGATGATTTACTAA 474 0.4599 MGKKTLKLPSLFKTKESPPPLLRKHPWQLFPSFSQRRNLKSTLSSDDLVFPDPTDDDDENYRYGESLEMFVSRGVRSERLFFEPGGNTTSSILEKAKADHNGNGGFPLEENGVVLLAMESEDPCGDFRRSMEEMVESHGVKGWKGLEELLSWYLMIY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi398g00005 157 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 46 154 IPR038933 GO:0045892
Sebi398g00005 157 Pfam Transcriptional repressor, ovate 120 155 IPR006458 -
Sebi398g00005 157 MobiDBLite consensus disorder prediction 1 23 - -
Sebi398g00005 157 ProSiteProfiles OVATE domain profile. 116 157 IPR006458 -
Sebi398g00005 157 NCBIfam uncharacterized plant-specific domain TIGR01568 114 156 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi398g00005 Sebi-Chr398 128640 129159 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sebi398g00005 Ovate 2.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi398g00005 - - gmx:100527123 151.369