Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi396g00001 ATGGAACAGTTCATAGACAACTTGCCGCCGATGGATCTGATGCGATCCGAGAAGATGTCATTCGTTCAGCTCATCATCCCCGCCGAGTCCGCTCACCGAGCCATCTCCTATTTGGGCGAACTCGGCCTCCTCCAATTTCGAGACTTAAATGCTGATAAAAGCCCTTTCCAGAGAACATTTGTTAATCAGGTAAAGCGATGTGCGGAAATGTCAAGAAAGCTGCGATTCTTCAAGGATCAAATCAATAAAGCTGGTCTAATGTCTTCTTCTCGCACTGTATTGCAACCAGACATTGACTTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAATAGTGACAAACTTCGGCAATCATATAATGAACTCCTGGAATTCAAGATTGTATTACAGAAGGCATGTGGGTTTCTTGTTTCAAGTCATGGCCGTGCTGTTCCAGATGAGAGAGAACTACAAGAGAATGTATACTCAAATGATGACTATGTTGACACATCATCTTTGCTTGAACAGGAAATGAGGTCTCAACCATCATATACGTCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGGTGAACAAATCATGGATCCTGTTTCAACTGAGATGGCAAGAACAAAAATTCTGAAAATTTGTGAGGCATTTGGTGCCAATTGTTATCCTGTTCCTGAAGATATAAGTAAGCAGAGGCAGATAACTAGGGAGGTTTCATCACGTCTTACTGACCTAGAAGCAACTTTGGATGCTGGGATTAGGCACCGGAACAAGGCTTTAGCTTCTGTCGCGGACCATCTAGCAAAATGGATGAACCTGGTAAGAAGAGAGAAGGCCGTGTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTATGTTTGCAAAAACACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGTATAATCTTCCATCCAATGGATGCAGTGGAATCACCTCCTACATATTTTAGGACCAATACTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTATACAACTGTTATATTCCCCTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTAATTCTTATAGCACGTGAAAACAAACTCAGCACGCAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTGATTCTTTTGATGGCACTATTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTTTCTGTTCCTTTTCACATATTTGGTGAGTCAGCTTATCGATGCCGCGATAATTCATGCAGGGATGCACATACTATTGGCTTAGTCAAAGTCCGAGATCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGATCGGAATTGTCTTTTCTGAACTCTATGAAGATGAAGATGTCTATTCTGTTTGGTGTGGCACATATGAACTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGAAGCTCACTGGATATAAGATACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTATTTGGACAATCTTGGAGAGAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGCTTTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTCTGCTGAAGAAGCTTCATAGTGAGAGATTTCAAGGTCGTAGTTACGGTATTTTGAATACTTCTGAGATGGATCTTGAGGTAGAGCCGGATTCTGCCAGGCAACATCATCATCATGAAGAATTCAATTTCAGCGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACTGCGTCATATCTTCGACTTTGGGCATTAAGTTTGGCTCACTCAGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTCTTGCCTGGGGGTATGACAACCTTGTTGTTCGGTTAGTGGGGCTCACTGTTTTTGCCTTTGCAACTGCCTTTATACTACTTATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCCACAAGTTCAGGCCTTTTTCATTTGCTTCCTTAACAGAGGATGATGATTGA 2331 0.4131 MEQFIDNLPPMDLMRSEKMSFVQLIIPAESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHGRAVPDERELQENVYSNDDYVDTSSLLEQEMRSQPSYTSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPAGEQIMDPVSTEMARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASVADHLAKWMNLVRREKAVYDTLNMLNFDVTKKCLVGEGWCPMFAKTQMQEALQRATFDSNSQVGIIFHPMDAVESPPTYFRTNTFTSPYQEIVDAYGVARYQEANPAVYTTVIFPFLFALMFGDWGHGICLLLGALILIARENKLSTQKLGSFMEMLFGGRYVILLMALFSIYCGLIYNEFFSVPFHIFGESAYRCRDNSCRDAHTIGLVKVRDPYPFGVDPSWRGSRSELSFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNSLFGQSWRESVVLGPKTTSNCALLLAVIAVPWMLFPKPFLLKKLHSERFQGRSYGILNTSEMDLEVEPDSARQHHHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVVRLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGHKFRPFSFASLTEDDD 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi396g00001 776 PIRSF ATP6V0A1 9 582 IPR026028 GO:0000220|GO:0046961
Sebi396g00001 776 PIRSF ATP6V0A1 583 776 IPR026028 GO:0000220|GO:0046961
Sebi396g00001 776 Coils Coil 100 127 - -
Sebi396g00001 776 PANTHER VACUOLAR PROTON ATPASES 13 579 IPR002490 GO:0033179|GO:0046961|GO:1902600
Sebi396g00001 776 Pfam V-type ATPase 116kDa subunit family 37 579 IPR002490 GO:0033179|GO:0046961|GO:1902600
Sebi396g00001 776 Pfam V-type ATPase 116kDa subunit family 593 768 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi396g00001 Sebi-Chr396 48720 59259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi396g00001 1 769 Primary Pumps ATPases(2) AT2G28520 73.865 0.0 1225