Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi395g00088 ATGGGACAAGAATCAGATTCCAAGGCCAAGTTGGTGTTAGAGATTTGCTCCATTTCCATGCGTTCTGGGCTGTGTGCTCACAGACATCTCCCAAGCCCACCAGCAAATGCAACTTTCATCGACTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTTAATGCCATTCGCAAGCGATACCATAAACTAGCCTTGCAACTTCATCCAGATAAGAACAAACATCCAAAGGCTGAAATTGCTTTCAAGCTTGTTTCTGAGGCATATACATGTCTCTCTAATGCAGCAAAGAGAAAAGCTTTTGACTTGGAGAGGTATAAGCATCTCTGCTTTGAGTGCAGAAGAATCCCATATACATCATCCGGCAATTCTAATGGTTCAGGTTTCAAGGCATGGAATATTATCAGCAGGTCAAGATCTTTTAAACTTTGGAGAAATATTAGGGACATGAGAGAGAGATTCAAGGAGGAGGCTAAGGTGATAGAGAACTGTTTGCGAACAAATTCAATGTCAAGGAAAGAATCTCCACTCTACAATCCGGTTGGTTATCTACACAGAAGCAAGTCACTGCATAGATTTGAGAAAGAAACCCCTGTTTTCAATCCATCAGACTACTTGTACCAAGGCTACCCTCACCTCAGGGGCCATGTTTACAAGAATTCTTCGACATTTTGGTACTTGCAGACAATTAGTATGCTGCACAATGGAAAGAGAGGAGTGCAGAACGCCTCCCCAGTTTTTGAGGTCAAAACAAGGAATACGTTTACAGGCAAATTTGCTTTTGTCCCATCATCATGA 798 0.4236 MGQESDSKAKLVLEICSISMRSGLCAHRHLPSPPANATFIDWYCILGVEENAGVNAIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEAYTCLSNAAKRKAFDLERYKHLCFECRRIPYTSSGNSNGSGFKAWNIISRSRSFKLWRNIRDMRERFKEEAKVIENCLRTNSMSRKESPLYNPVGYLHRSKSLHRFEKETPVFNPSDYLYQGYPHLRGHVYKNSSTFWYLQTISMLHNGKRGVQNASPVFEVKTRNTFTGKFAFVPSS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi395g00088 265 PANTHER BNAC03G44070D PROTEIN 9 226 - -
Sebi395g00088 265 CDD DnaJ 41 94 IPR001623 -
Sebi395g00088 265 Gene3D DnaJ domain 40 161 IPR036869 -
Sebi395g00088 265 SMART dnaj_3 40 97 IPR001623 -
Sebi395g00088 265 SUPERFAMILY Chaperone J-domain 37 105 IPR036869 -
Sebi395g00088 265 PRINTS DnaJ domain signature 61 76 IPR001623 -
Sebi395g00088 265 PRINTS DnaJ domain signature 77 97 IPR001623 -
Sebi395g00088 265 PRINTS DnaJ domain signature 43 61 IPR001623 -
Sebi395g00088 265 FunFam Chaperone protein dnaJ 49 isoform A 40 160 - -
Sebi395g00088 265 Pfam DnaJ domain 41 102 IPR001623 -
Sebi395g00088 265 ProSiteProfiles dnaJ domain profile. 41 105 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi395g00088 Sebi-Chr395 976517 977704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi395g00088 41 102 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 42.424 4.87e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi395g00088 - - gmx:100801809 441.81