Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi395g00087 ATGGTTCATTTTCCATATTCATTTGTCAATGGATTGGCGAGAACTGTGTCAATCAAGAAAGAGAAGAACTGTAAAAAAAAACATGATGGAAGGAAAGCTGTGGAAGAATTGGCAAAGGAAGCAAAGAAGAATGAATTGTTATTGAGTTCATCTGGAGTTGTTAAGTCAACCAAGGCCAACAGTTTTGTTTCTGTGTTCACTAATAAGGGCCAGAAAGGAGTCAACCAGGATTGTCTTGTGGTTTGGGAGGAATTTGGTTGCCAACAAGACATGATGTTCTGTGGAATTTTTGATGGACATGGCCCTTGGGGACACTTTGTAGCCAAAAGGGATCTGAAGCAGCACACTGGGATTGATTCCTTTCAAAGTGGCACTACAGCTTTGACAATTATCAAACAGGGTGAATATCTTAGCATAGCAAATGTAGGTGATTGTAGGGCAGTCTTGGTAACCACTTCAGAGGATGGAACATTAACTCCAATTCAACTTACCACTGACTTCAAGCCAAATTTACCACAGGAAGCAGAGCGCATAAAACAATCCAGAGGGCGGGTATTTTGTTTGGAAGATGAACCAGGAGTGTACAGGGTCTGGATGCCAAATTCCAAACACCAGGACTAG 621 0.4171 MVHFPYSFVNGLARTVSIKKEKNCKKKHDGRKAVEELAKEAKKNELLLSSSGVVKSTKANSFVSVFTNKGQKGVNQDCLVVWEEFGCQQDMMFCGIFDGHGPWGHFVAKRDLKQHTGIDSFQSGTTALTIIKQGEYLSIANVGDCRAVLVTTSEDGTLTPIQLTTDFKPNLPQEAERIKQSRGRVFCLEDEPGVYRVWMPNSKHQD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi395g00087 206 SUPERFAMILY PP2C-like 56 187 IPR036457 -
Sebi395g00087 206 Gene3D - 49 110 IPR036457 -
Sebi395g00087 206 Pfam Protein phosphatase 2C 121 186 IPR001932 -
Sebi395g00087 206 ProSiteProfiles PPM-type phosphatase domain profile. 62 206 IPR001932 -
Sebi395g00087 206 Gene3D - 111 206 IPR036457 -
Sebi395g00087 206 CDD PP2Cc 62 186 IPR001932 -
Sebi395g00087 206 PANTHER PROTEIN PHOSPHATASE 42 198 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi395g00087 Sebi-Chr395 940477 941867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi395g00087 1 200 PP2C-type Phosphatase Gene Family AT3G05640 49.799 1.74e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi395g00087 - - gmx:100814087 323.939