Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi395g00084 ATGGTTGGGGACATCTTTGGCAAGAGCTGGGGATCCGCTCAATCTTCGGGTGGCGTTGGGATTGTTAATAAGAACCCCAATCTATTCGGAGATTTGGTGAGCTCTGCTTTAGGACAGGGTTCTAAGACTTCTTCTGCCAATGTTCCTCTGAAAAATGCAGCTCCTACACCCAAAAAGTCCTCCTTTTCCATGGGAAGTATGGCTGATTCTTTGCCTAAAACTGGTAACACGCCACAAACTAGTGCTACTTGGGGATCTTCTGGGAATTTTAACATGAACGCCAATAAAACCCCCAATCTCGGGGGTCCTTCATTGCGAAACATGGGTGGTGGTGGTGGTGCATCTGCAACTGGAATCAGTTCTAATAACAAAGATCCATTCAGTTCTTTGGCTGGTTTTGGATCCAAGCAGTCTGCTAGTCTTAATTCAGCAGCAAAAGCCCAAAAGCTTGATTCAGCAGATGATGGTTTTGGAGATTTTCAGAATGCTTCCAAACCAAGCTCTACTGCGTTTCCATCAAGTGGTACTGCAGGAATTAATGTTGATTTTACTGGATCTACTTCCTCGAACCAGACCCCTGTTCAGGCATCAGGTGGTGATCCAATGGACATGTTTTTCACATCTTCATCGGCCTCTTCTGGAGGTGCTGCTGCAGCCTCTCAAGGGTTTGGAGGACAGCCCTCTTCTGAAATGGTTGATTGGGGTTTGGATTCTGAGTTTGGTGGGGGTGACCATGATGTGGGTGGCACAACTACTGAGCTCGAGGGGCTTCCACCTCCTCCTTCTGGGGTATCAGGTTCCACTGCCAAAGGCAAGGGGATGGACAATTACAAGCAGGGACAATTTGCTGATGCTATTAAGTGGCTTTCATGGGCTGTCATCCTTCTAGAGAAAGCTGGAGATAATGAAGCCACAGTGGAAGTCTTGTCATGTAGGGCTTCATGTTACAAAGAAGTCGGGGAGTATAAAAAGGCAGTGGCGGATTGTACAAAGATTCTTGAAGATGATGAAGCCAATGTATCTGTCCTTGTACAACGTGCTCTCTTGTATGAGAGTATGGAGAAGTACAGACTTGGTGCTGAAGACCTGAGGACTGTGCTGAAGATTGATCCAAGTAATAGGATTGCTAGAAGTACTATTCACCGGTTGAACAAGATGGCCGATTAG 1167 0.4644 MVGDIFGKSWGSAQSSGGVGIVNKNPNLFGDLVSSALGQGSKTSSANVPLKNAAPTPKKSSFSMGSMADSLPKTGNTPQTSATWGSSGNFNMNANKTPNLGGPSLRNMGGGGGASATGISSNNKDPFSSLAGFGSKQSASLNSAAKAQKLDSADDGFGDFQNASKPSSTAFPSSGTAGINVDFTGSTSSNQTPVQASGGDPMDMFFTSSSASSGGAAAASQGFGGQPSSEMVDWGLDSEFGGGDHDVGGTTTELEGLPPPPSGVSGSTAKGKGMDNYKQGQFADAIKWLSWAVILLEKAGDNEATVEVLSCRASCYKEVGEYKKAVADCTKILEDDEANVSVLVQRALLYESMEKYRLGAEDLRTVLKIDPSNRIARSTIHRLNKMAD 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi395g00084 388 Gene3D Tetratricopeptide repeat domain 265 388 IPR011990 GO:0005515
Sebi395g00084 388 MobiDBLite consensus disorder prediction 40 121 - -
Sebi395g00084 388 ProSiteProfiles TPR repeat profile. 340 373 IPR019734 GO:0005515
Sebi395g00084 388 PANTHER OS03G0340700 PROTEIN 1 388 - -
Sebi395g00084 388 SMART tpr_5 306 339 IPR019734 GO:0005515
Sebi395g00084 388 SMART tpr_5 340 373 IPR019734 GO:0005515
Sebi395g00084 388 SMART tpr_5 266 299 IPR019734 GO:0005515
Sebi395g00084 388 MobiDBLite consensus disorder prediction 157 176 - -
Sebi395g00084 388 MobiDBLite consensus disorder prediction 248 270 - -
Sebi395g00084 388 MobiDBLite consensus disorder prediction 40 102 - -
Sebi395g00084 388 MobiDBLite consensus disorder prediction 182 211 - -
Sebi395g00084 388 MobiDBLite consensus disorder prediction 161 176 - -
Sebi395g00084 388 SUPERFAMILY TPR-like 270 381 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi395g00084 Sebi-Chr395 899176 903318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi395g00084 265 385 Calmodulin-binding Proteins AT3G25230 29.231 1.02e-08 55.1