Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi395g00061 ATGGAGGATTCATTAGGGCAAAAGTGGAAGAACAGAGAGTTCGCTTTGGTATCAGTTGCCGACCTCTCTTCGGTTTCTTCTTCTGCTTCGCCCGGGATTGCTCGCTTCGACTCTAACGGTCTCCAAATTCATCAACAGTCTCAACAGATTCCATTCAATGTCGATCTCAGAACTGCTCAGCTATTCAGATTGGGTTCTGTTCAATCGGTTTGCATGGTGGAAGGTTCTGATGCTGATCAAAAGATATCATATTCCAGGGGAGTCACTATCCAGTTTAGAAATGAGGAGGAGAGTGCAGCCTTCCACTCTGTAGTCCAAAAATGGAAGAAGGAAGCCAATGTTCAAGGAGGAAACTTACCAAATGGAACATTAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGCCGTCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCACCAGCAAAATATGTTGCAGGACTATGTGCGAACAGGAACCTATTATGCTGCTGTTATTGAGAACCGTGCTGATTTCCTTGGTCGTATAGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGCTGGTGCAAAACATGTTTATTGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGGAACCCAACACTGGCTCAACGAATTACAGTGATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACTTTGTTGGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTCCTCACTCCTACTGGGAAAATGTTTCCTGGAGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATTGAAATTGCTAATAAGGCCCTGTTCTGGCAGCAGCAAAACTACTACGGTGTTGATTTGACACCCTTACATGGGACTGCATTTCAGGGATACTTTTCTCAGCCTGTTGTGGATGCTTTTGATCCAAGATTATTAATAGCTCCCCCAATGTTCCATGTGATAGACTTCACCAAAATAAAGGAAGAAGAATTGTATGAAATTGACATTCCTCTGAGATTTATAGCCTCTGTGGGTGCCAGAGTACATGGGTTGGCGTGTTGGTTCGATGTACTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCGACAACCCATTGGTACCAGTTACGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGAAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATATATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAGCAAGGGGGGATTCTTCAAACATCATCATGTAAGCTTGATCTGAAAGAACCCTACTATAGAATGTCTCAACCTCAAGCTTATGCATTAGCCCAAGATCAGCAACCTCAACCACTCATACAGACTCAGGGTATCCCTGCAGGCATTGCCATGAGACTAATTCCTTAG 1527 0.4283 MEDSLGQKWKNREFALVSVADLSSVSSSASPGIARFDSNGLQIHQQSQQIPFNVDLRTAQLFRLGSVQSVCMVEGSDADQKISYSRGVTIQFRNEEESAAFHSVVQKWKKEANVQGGNLPNGTLITSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFLGRIVVDVGAGSGILLVQNMFIAVEASEMAEYARKLIAGNPTLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVIDFTKIKEEELYEIDIPLRFIASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQPQPLIQTQGIPAGIAMRLIP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi395g00061 508 Gene3D - 279 487 - -
Sebi395g00061 508 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 451 IPR029063 -
Sebi395g00061 508 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 445 IPR025799 GO:0016274|GO:0018216
Sebi395g00061 508 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 94 460 IPR025799 GO:0016274|GO:0018216
Sebi395g00061 508 FunFam Probable histone-arginine methyltransferase CARM1 279 486 - -
Sebi395g00061 508 FunFam Probable histone-arginine methyltransferase CARM1 123 277 - -
Sebi395g00061 508 CDD AdoMet_MTases 182 276 - -
Sebi395g00061 508 Gene3D Vaccinia Virus protein VP39 123 277 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi395g00061 Sebi-Chr395 659015 664980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi395g00061 45 427 C2H2 Transcription Factor Family AT3G12270 27.295 8.31e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi395g00061 K05931 - gmx:100780736 861.677