Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi395g00044 ATGTTTCGCTTAAGACCTCTTCTGAACCGCAACACTATCACTATCTTCCAACTATCTCTGTCACCAACCCCAAAATGTTACCCTTTTCTGAAACCCCACCCATACCCATCGTCAATCTCTCTCAAATGCTTCTCAACCACTTCACATCAACAACCTTTCATCATATCCTACCTCACAAACAATTGTGGTTTCTCACCACAAGCTGCTCTAAAAGCATCCAAGAATCTCTATTTTGACACCTCCCAGAAGCCCGATTCTGTTATCGCCTTCTTCAGAGACCATGGTTTCTCTCTCCCCCAGATACACAACATCATTGGCAGGATTCCGAATTTGCTTGTATGCAACCCCATCAAAAGGGTTTTGCCCAAGTTTGAATTTTTAGCCCCCAAAGGTGCTTCTCCCTCCGATATTGTTACCATGGTGACTAGGAGCCCGCGTTTCCTGCGTTCAAGCCTTGAGAATCACATAATCCCTGCATTTGAATTAGTAAGGAGATTCTTTCCATCTGATAGAAGAGCCATTGTTTGTGTAATTGCTTGTCCCAGTTCCATTGTTGATCCTCGCTTGGAGCAAAATGTGAACTTGTTGCTTGAATTTGGAGTGTCTCCCTCAAACATTCGCTATCTGCTTTGTACTAGGACCTCTATACTCTGCTCTGCTATCTTGAGGAAAGTCATGGAGGAAATAAAGGGATTAGGATTTGATCCTTCCAAAATAAATTTTATTGTAGCATTACTGGCTGAAAGGGCTGTAACCAAATCCCAGTGGGATGCCAAAGTTGATACCTTGAAGACCTGGGGCTGGTCTGAAGATGCAATTTCACATGCGTTTAAGAAGGATCCCTGCTTCATGATACGGTCTACGGACAAACTCAATGCTGTGATGAGTTTTTGGATCCGCCAGCTTGGTTGGGATCCTTCTCCTCTTCTAGCATTTCCTATACTTTTTGGATATAGTTTGGAGAAAAGGCTTATTCCAAGGGCTTCAGTTGTTCAGTATCTTCTCTCCAAAGGTTTGATGAAGAATGGTGCTAGCTTAGCTACACCATTTCGTATTTCTGATGAGTTGTTCCTGCAAAGGTTTGTGAATTGTTTTGAGAAGGAGGAAGCATCTAGGCTACTAAGGTTATATCAAGGAGGATGCTAG 1146 0.4293 MFRLRPLLNRNTITIFQLSLSPTPKCYPFLKPHPYPSSISLKCFSTTSHQQPFIISYLTNNCGFSPQAALKASKNLYFDTSQKPDSVIAFFRDHGFSLPQIHNIIGRIPNLLVCNPIKRVLPKFEFLAPKGASPSDIVTMVTRSPRFLRSSLENHIIPAFELVRRFFPSDRRAIVCVIACPSSIVDPRLEQNVNLLLEFGVSPSNIRYLLCTRTSILCSAILRKVMEEIKGLGFDPSKINFIVALLAERAVTKSQWDAKVDTLKTWGWSEDAISHAFKKDPCFMIRSTDKLNAVMSFWIRQLGWDPSPLLAFPILFGYSLEKRLIPRASVVQYLLSKGLMKNGASLATPFRISDELFLQRFVNCFEKEEASRLLRLYQGGC 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi395g00044 381 FunFam Mitochondrial transcription termination factor-like 152 369 - -
Sebi395g00044 381 Pfam mTERF 188 358 IPR003690 GO:0003690|GO:0006355
Sebi395g00044 381 Pfam mTERF 89 287 IPR003690 GO:0003690|GO:0006355
Sebi395g00044 381 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Sebi395g00044 381 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Sebi395g00044 381 SMART mt_12 138 168 IPR003690 GO:0003690|GO:0006355
Sebi395g00044 381 SMART mt_12 207 235 IPR003690 GO:0003690|GO:0006355
Sebi395g00044 381 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Sebi395g00044 381 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Sebi395g00044 381 Gene3D Transcription termination factor 3, mitochondrial 182 370 IPR038538 -
Sebi395g00044 381 PANTHER CGI-12 PROTEIN-RELATED 54 369 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi395g00044 Sebi-Chr395 511251 512396 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi395g00044 mTERF 7.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi395g00044 K15031 - gmx:102666739 358.992