Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi395g00037 ATGGCTGCTCTCATGCGACCTCGACAAGGCAGTGTTGCCCAAATTGTTGAGGAATTGAAGGAACTGGGTTTCGATTCTTCAACTTCACCTTTCAGCGTGGCATTGCTTGCCAAGGGATCTGTAAGCGAGACCAGCTGGGCTGAGAAAATTGACACCTTTAAGAGGTGGGGGTGGTCTGAACAACAAGTTCTTCAAGCATTTAAGAAGCAGCCTTATTGTATGTTGACGTCCATTGATAAAATTAATGCAGTGATGAGTTTTTGGGTTGATCAGTTAGGTTTGAACTCTTTGGACCTTGTCAAAGCTCCATCATTTTTTCAATGGAGTCTTGAGAAGAGGATTATTCCAAGGGCTTCAGTTGTGCAGTTTCTTGTCTCAAAAGGACTAAGAGAAAAGGGTGCAGGCATAACTACACCATTCACTCTTTCTGAGAAGTTGTTCCTGGAAAGGTTTGTGAAATGCTTTAAGGAGGATTCTTCTCATCTGTTAAAGATGTACCAGGAAAAAATGAATCTTGCAAATAGCAGGGAGAAGCCTTCACCAAGTGCATAA 552 0.4239 MAALMRPRQGSVAQIVEELKELGFDSSTSPFSVALLAKGSVSETSWAEKIDTFKRWGWSEQQVLQAFKKQPYCMLTSIDKINAVMSFWVDQLGLNSLDLVKAPSFFQWSLEKRIIPRASVVQFLVSKGLREKGAGITTPFTLSEKLFLERFVKCFKEDSSHLLKMYQEKMNLANSREKPSPSA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi395g00037 183 Pfam mTERF 40 144 IPR003690 GO:0003690|GO:0006355
Sebi395g00037 183 Gene3D Transcription termination factor 3, mitochondrial 2 165 IPR038538 -
Sebi395g00037 183 SMART mt_12 64 95 IPR003690 GO:0003690|GO:0006355
Sebi395g00037 183 SMART mt_12 96 130 IPR003690 GO:0003690|GO:0006355
Sebi395g00037 183 PANTHER CGI-12 PROTEIN-RELATED 11 156 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi395g00037 Sebi-Chr395 393422 394279 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi395g00037 mTERF 1.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi395g00037 K15031 - gmx:102667698 234.572