Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi395g00032 ATGGGATGGAGAAGTAGAGATTTAATAGAAATAAGAAAAGAAGATTTTAAAAGTAGGTGGAAAGGGAAGAATGGTCTTCCAAAGAATGACATCTGCAAAATGTCCTTTTTCTTCTCTCATGATCAACTCTCAGTCTTTAAAGACTCCCCACGACCTCTCCCATTCATCATAACCTTCCTTCTGTTCTGCAGTCCCATTCTCTTCACTTCACTTGTTGCCTTGCCACTATTCAACTTCCCATACATTTTCTCACCTCATTCACTCCCTATTTTCCTTGCCATGTCAACCTCTAGAACCTCAGATACATCATCCTTCAAAGGATATCATGAACCAAATCAAACCCAAATGTGTCTATCTCTTCTTCAACGTAACACATCTCCTTCAGGTGAGAGGAGAGGCAGAAGGAAGCACGCAGAACCAGGGAGGTTTCTTGGGGTTAGGAGGCGCCCTTGGGGTCGATATGCTGCCGAAATTAGAGACCCTACAACTAAAGAAAGGCATTGGCTTGGCACATTTGACACTGCTCAAGAAGCAGCTCTGCTTATGACAGAGCTGCTCTGTCCATGA 567 0.4356 MGWRSRDLIEIRKEDFKSRWKGKNGLPKNDICKMSFFFSHDQLSVFKDSPRPLPFIITFLLFCSPILFTSLVALPLFNFPYIFSPHSLPIFLAMSTSRTSDTSSFKGYHEPNQTQMCLSLLQRNTSPSGERRGRRKHAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALLMTELLCP 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi395g00032 188 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 115 180 - -
Sebi395g00032 188 SMART rav1_2 142 184 IPR001471 GO:0003700|GO:0006355
Sebi395g00032 188 CDD AP2 142 180 IPR001471 GO:0003700|GO:0006355
Sebi395g00032 188 PRINTS Ethylene responsive element binding protein signature 165 181 IPR001471 GO:0003700|GO:0006355
Sebi395g00032 188 PRINTS Ethylene responsive element binding protein signature 143 154 IPR001471 GO:0003700|GO:0006355
Sebi395g00032 188 ProSiteProfiles AP2/ERF domain profile. 142 179 IPR001471 GO:0003700|GO:0006355
Sebi395g00032 188 Gene3D AP2/ERF domain 142 184 IPR036955 GO:0003700|GO:0006355
Sebi395g00032 188 SUPERFAMILY DNA-binding domain 143 180 IPR016177 GO:0003677
Sebi395g00032 188 Pfam AP2 domain 145 181 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi395g00032 Sebi-Chr395 356347 356913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi395g00032 94 180 AP2-EREBP Transcription Factor Family AT5G18560 69.474 7.64e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sebi395g00032 AP2 3.6e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi395g00032 - - gmx:102664746 167.162