Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi394g00090 ATGGGTGGTAGTGATGAGTTTGGCACCTTGTCAACTTTGCCTACAATGTGGTCCATGTATATATATCTATCTCAATCTGCATGGAATTGGAAGGAGATAAACATGCTCAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGTAATAGTTATAAAGGCATTCCTTGTGAGATCACCAATGGCTACAAAATTCTTCCTGATGTTCGTAGAACAAGCAGTTTCTCTTGCTTGTCAGGTGCAGCCTTAAGTGCAAATGCTACACTAGCCAACACAAACATCTGCAACGGCAAGATAGGAGGGGAAATTCTTCCAAGTTGGGACTCTCCTAATTCATTTCGTAAAGTACCCTCTTCTCCAAGTCTTTCAAAGTTGGACAGACTATCATCTTCCCTCCCAAATAGTTTGTCTTACCTAAGCTGCAGTCCTTCCACTCCAAGTGATATCCTTGAATATGACTCTTGCACATCAAAATCCATGAGTGATCTTTCCAGAAGTGAAGGCTTTCTTAATGCTGAAGAAGTTCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAACGGGTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGGAGAGACGCGGCTGACTTTCTGGCTGGTACCCTGTATGACACCATCATATCTTACTTAGATAAGTTAATTTGGGAATTGGATCCGGGTTTGATCAAAGCTTCTAACAGCGTGGGTTTGGGTGAAGCCCTTCAATATAAGTTGGATTATAGTCTTATTCATCATGAGGATCAATCTCTGTCAAGATTCAAGGGGAGAAATGATTGTAATCATGGTTGTTTTGCAAAGGGTAGTCCATCTACTAAGTCAGAAGCATCATGTGACTCATTTTCGAATGGGGTACTTGATAGCCTCCAATGTGCTCTTATTCAGGCTGAGAATGATTTCCTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTTTTGCTTCTTCACGGTAATGATCTGTATACACTTAATCTAGGTGATAGCAGAGCAGTATTAGCAACATGCAGTACAGGTGACAGACTGAATAAGAGTGAGAGGCTCCAGGCTATTCAGCTTACAGATAGTCATACAGTTGAAAATGAAGCTGAAAGAGCTAGACTTATGGCTGATCATCCTGATGATTCCAAGGTCATTATAGCAGGAAAAGTGAAAGGTAAACTGAAGGTTACTCGTGCATTTGGAGTTGGCTACTTGAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCATAATCTTACAAGCCCACCATATATTTCCACTCAACCATCACTGAATGTCCATAAAATCTCAAGTGCTGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTTGTAGAGTCTTATATCTTGAGCAATCCTTTGGGTGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTGGCTAGAGCAGCTGATTCTGCAGGTTTCAGTATGGAAGAGTTGATGAATGTTCCAGCTGGGAGGAGAAGAAAGTACCATGATGACGTGACCGTAATTGTGATCATGCTTGGGATGAATCAGAGGACTTCAAAGGCTTCAACCTGCATCTAG 1677 0.4091 MGGSDEFGTLSTLPTMWSMYIYLSQSAWNWKEINMLSPEGELKISFGYKCNSYKGIPCEITNGYKILPDVRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSFRKVPSSPSLSKLDRLSSSLPNSLSYLSCSPSTPSDILEYDSCTSKSMSDLSRSEGFLNAEEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYLDKLIWELDPGLIKASNSVGLGEALQYKLDYSLIHHEDQSLSRFKGRNDCNHGCFAKGSPSTKSEASCDSFSNGVLDSLQCALIQAENDFLYMVEQEMEERPDLVSIGSCVLLLLLHGNDLYTLNLGDSRAVLATCSTGDRLNKSERLQAIQLTDSHTVENEAERARLMADHPDDSKVIIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVHNLTSPPYISTQPSLNVHKISSADQFVIVGSDGLFDFFSNDEAVKLVESYILSNPLGDPAKFLIEQLVARAADSAGFSMEELMNVPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi394g00090 558 PANTHER PROTEIN PHOSPHATASE 2C 175 543 IPR015655 GO:0004722|GO:0006470
Sebi394g00090 558 FunFam Probable protein phosphatase 2C 40 151 554 - -
Sebi394g00090 558 SUPERFAMILY PP2C-like 184 546 IPR036457 -
Sebi394g00090 558 Pfam Protein phosphatase 2C 315 508 IPR001932 -
Sebi394g00090 558 Gene3D - 146 554 IPR036457 -
Sebi394g00090 558 ProSiteProfiles PPM-type phosphatase domain profile. 170 545 IPR001932 -
Sebi394g00090 558 CDD PP2Cc 183 543 IPR001932 -
Sebi394g00090 558 SMART PP2C_4 157 543 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi394g00090 Sebi-Chr394 896054 901041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi394g00090 38 558 PP2C-type Phosphatase Gene Family AT3G16560 62.239 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi394g00090 - - gmx:100808304 879.782