Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi394g00085 ATGGAGGATTCATTAGGGCAAAAGTGGAAGAACAGAGAGTTCGCTTTGGTATCAGTTGCCGACCTCTCTTCGGTTTCTTCTTCTGCTTCGCCCGGGATTGCTCGCTTCGACTCTAACGGTCTTCAAATTCATCAACAGTCTCAACAGATTCCATTCAATGTCGATCTCAGAACTTCTCAGCTATTCAGATTGGGTTCTGTTCAATCGGTTTGCATGGTGGAAGATTCTGATGCTGATCAAAAGATATCATATTCCAAGGGAGTCACTATCCAGTTTAGAAATGAGGAGGAGAGTGCAGCCTTCCACTCTGTAGTCCAACAATGGAAGAAGGAAGCCAATGTTCAAGGAACCTATTATGCTGCTGTTATTGAGAACCGTGCTGATTTCAATGGTCGTATAGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGGAACCCAACACTGGCTCAACGAATTACAGTGATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACTTTGTTGGTTAATGAAAGAATGTTGGAGTCTTATGTCATTGCCAGAGATAGGTTCCTCACTCCTACTGGGAAAATGTTTCCTGGAGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATTGAAATTGCTAATAAGGCCCTGTTCTGGCAGCAGCAAAACTACTATGGTGTTGATTTGACACCCTTACACGGGACTGCATTTCAAGGATACTTTTCTCAGGTATCATACCAGCTTGTTTTTCAGAACATTGGTGTTGACATAGAAATGCACTGTAGAGGTTCAAATTGGCAAACAGAATTTGGTAGAGATATTAATAATTTCATTCATTATTGCCTTCAGCCTTTAGGGATATATCTTCTGAGTGTTCCTGTTGTGGATGCTTTTGATCCAAGATTATTAATAGCTCCCCCAATGTTCCATGTGATAGACTTCACCAAAATAAAGGAAGAAGAATTGTATGAAATTGACATTCCTCTGAGATTTATAGCCTCTGTGGGTGCCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCGACAACCCATTGGTACCAGTTACGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGAAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATATATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAGCAAGGGGGGATTCTTCAAACATCATCATGTAAGCTTGATCTAAAAGAACCCTACTATAGAATGTCTCAGCCTCAAGCTTATGCATTAGCCCAAGATCAGCAACCTCAACCACTCATACAGACTCAGGATATACATATCCAATCTCAGGAATTGGATGAACCTGATATAATGCAACAGCCTTCGCCTAATCGATGTGCTCAAATTGATTCGCTGATGCAGAATGTTTAA 1611 0.4184 MEDSLGQKWKNREFALVSVADLSSVSSSASPGIARFDSNGLQIHQQSQQIPFNVDLRTSQLFRLGSVQSVCMVEDSDADQKISYSKGVTIQFRNEEESAAFHSVVQQWKKEANVQGTYYAAVIENRADFNGRIVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPTLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQVSYQLVFQNIGVDIEMHCRGSNWQTEFGRDINNFIHYCLQPLGIYLLSVPVVDAFDPRLLIAPPMFHVIDFTKIKEEELYEIDIPLRFIASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYALAQDQQPQPLIQTQDIHIQSQELDEPDIMQQPSPNRCAQIDSLMQNV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi394g00085 536 Pfam Ribosomal protein L11 methyltransferase (PrmA) 130 204 - -
Sebi394g00085 536 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 90 452 IPR025799 GO:0016274|GO:0018216
Sebi394g00085 536 Gene3D - 298 494 - -
Sebi394g00085 536 Gene3D - 237 297 - -
Sebi394g00085 536 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 115 467 IPR025799 GO:0016274|GO:0018216
Sebi394g00085 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 458 IPR029063 -
Sebi394g00085 536 Gene3D Vaccinia Virus protein VP39 83 235 IPR029063 -
Sebi394g00085 536 FunFam Probable histone-arginine methyltransferase CARM1 73 235 - -
Sebi394g00085 536 CDD AdoMet_MTases 134 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi394g00085 Sebi-Chr394 864563 870724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi394g00085 118 433 C2H2 Transcription Factor Family AT3G12270 28.443 1.10e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi394g00085 K05931 - gmx:100780736 816.994