Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi394g00062 ATGAGGTTTCAAGATACCATGGTTCATTTTCCATATTCCTTTGTCAATGGATTGGCGAGAACTGTGTCAATCAAGAAAGAGAAGAATTGTCAAAAACATGATGGAAGGAAAGCTGTGGAAGAATTGGCAAAGGAAGCAAAGAAGAATGAATTGTTATTGAGTTCATCTGGAGTTGTTAAGTCAACCAAGGCCAACAGTTTTGTTTCTGTGTTCACTAATAAGGGCCAGAAAGGAGTCAACCAGGATTGTCTTGTGGTTTGGGAGGAATTTGGTTGCCAACAAGACATGATGTTCTGTGGAATTTTTGATGGACATGGCCCTTGGGGACACTTTGTAGCCAAAAGGGTCAGGAAGCTAGTACCAGCCTTTTTACTCTGCAATTGGCAGGAAAATCTAGCTGCAACTTCAATTGACCTGGATTTTAAAATGGAAGCAGACCTTGGATTGGACATATGGAAACAATCCTACCTAAAGACTTTCTCTGCCGTTGACCAGGATCTGAAGCAGCACACTGGGATTGATTCCTTTCAAAGTGGCACTACAGCTTTGACAATTATCAAACAGGGTGAATATCTTAGCATAGCAAATGTAGGTGATTGTAGGGCAGTCTTGGTAACCACTTCAGAGGATGGCACATTAACTCCAATTCAACTTACCACTGACTTCAAGCCAAATTTACCACAGGAAGCAGAGCGCATAAAACAATCCAGAGGGCGGGTATTTTGTTTGGAAGATGAACCAGGAGTGTACAGGGTCTGGATGCCAAATGCCAAAACACCAGGACTAGCAATATCTAGAGCTTTTGGTGACTACTGTATGAAGGACTTTGGAGTAATCTCAGTGCCAGATGTAACACACAGAAAACTTTCCACCAGGGATCAATTTATCATCTTGGCAACAGATGGGGTATGGGATGTTATATCTAACCAAGAAGCAATGAAGATTGTTTCTGAAACGCAACATAAAGAAAAAGCAGCTAAGAGGCTAGTGAAATGTGCCATACGTGAATGGAAACGAAAGAGAAGTGGCATTGCTATGGATGATATGTCAGCTATTTGCCTCTTCTTTCACTCTTCCCCCTCTCATCAACTCCTAGTCACTAAAGTTGTTGATTAA 1116 0.4158 MRFQDTMVHFPYSFVNGLARTVSIKKEKNCQKHDGRKAVEELAKEAKKNELLLSSSGVVKSTKANSFVSVFTNKGQKGVNQDCLVVWEEFGCQQDMMFCGIFDGHGPWGHFVAKRVRKLVPAFLLCNWQENLAATSIDLDFKMEADLGLDIWKQSYLKTFSAVDQDLKQHTGIDSFQSGTTALTIIKQGEYLSIANVGDCRAVLVTTSEDGTLTPIQLTTDFKPNLPQEAERIKQSRGRVFCLEDEPGVYRVWMPNAKTPGLAISRAFGDYCMKDFGVISVPDVTHRKLSTRDQFIILATDGVWDVISNQEAMKIVSETQHKEKAAKRLVKCAIREWKRKRSGIAMDDMSAICLFFHSSPSHQLLVTKVVD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi394g00062 371 CDD PP2Cc 67 356 IPR001932 -
Sebi394g00062 371 Pfam Protein phosphatase 2C 91 335 IPR001932 -
Sebi394g00062 371 Gene3D - 53 358 IPR036457 -
Sebi394g00062 371 SUPERFAMILY PP2C-like 61 358 IPR036457 -
Sebi394g00062 371 FunFam Probable protein phosphatase 2C 34 58 358 - -
Sebi394g00062 371 SMART PP2C_4 58 354 IPR001932 -
Sebi394g00062 371 PANTHER PROTEIN PHOSPHATASE 50 354 IPR015655 GO:0004722|GO:0006470
Sebi394g00062 371 ProSiteProfiles PPM-type phosphatase domain profile. 67 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi394g00062 Sebi-Chr394 641495 643505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi394g00062 7 357 PP2C-type Phosphatase Gene Family AT3G05640 62.360 2.12e-165 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi394g00062 - - gmx:100814087 635.95