Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi394g00019 ATGGTTGACACTTACAGTATAGAGAGCAGCAAGGTTCTTGTAAGAGAGTTTGATGAAGTTAGAGATGTTAAAGTGGTGGGGAAGCTTGAAAGGAACTGTGAGATTGGGACTAAAAAAGGGGTCTCTATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTACCCTCTTCATGTTATGTTGGTAGCTGAGTTGCTTGAAAGCAGAGAGCTTGTTGGAGTGGTTCGAGGATGCATTAAGAGTGTGTGCACTCCTGATTCTGGATCACTCCTCAAAATGGGTTGCATACTAGGCCTTAGAGTCTCTCCTACACACAGGAGAAAGGGGGTTGGACTAAAACTTGTTACCTCAATTGAAGAATGGATGAAGAGAAATGGGGCTGAATACACATTCCTAGCAACTGAAAAGAATAATGATGCCTCCAAAAACCTATTTACCAACAAATGCAACTATGTGAATCTCAGCTCACTTGTCATATTTGTCCATCCAACTAGTTTCCCTGCAAAGCATATTTCCAAGGATATTAAAATAGAGAAGGTAAATATAGACCAGGCAATTTCCTTGTATAAAAGAACCTTGAGGACCAATAAAGATTTGTATCCATTAGACATGGACATTATTTTGAAGGAGAAGCTCAGCTTAGGAACTTGGGTGAGTTATTACAAAGATGAAGGCATGCTTGACTTGCAGAGGAAGCTAATAGAGAGTGATGATCAAGACAACAACATTATTGCAAATGAAACCACAAGCTCATGGATCATCTTCAGCATATGGAATACTTGTGAGGCTTATAAGCTTCAATTGAAAAAGTCTCAGCCACTTAGGTTTCTTCATGCTACTTTGAATCGTGCAAGAGAGAAAATTTTCCCTTGTTTGAGAATGTCAGTGAGTGATGACTCATTGTGTAGACCTTTTGGGTTTCTTTTCCTCTATGGAATCCATGGAGAGGGAGAGAACCTTGGGGAGTTAATGGAATCTATATGGAGGTTCACATCAAGATTGGGGGAAAATTTGAAGGACTGCAGAGTGATTGTGACTGAGTTAGGGTTCGGTGATCCACTTGTAAACCATATCCCACAAACAGCTTCAATGTCGTGTATCGATGATGTGTGGTACACAAAAAGACTTTCAAGTCACAGTGATGGAAAGGATGAATTGATGAGGATGAAGAGACAACTCGGAAATGTGTTTGTTGACCCTAGGGATTTTTAG 1221 0.4021 MVDTYSIESSKVLVREFDEVRDVKVVGKLERNCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELLESRELVGVVRGCIKSVCTPDSGSLLKMGCILGLRVSPTHRRKGVGLKLVTSIEEWMKRNGAEYTFLATEKNNDASKNLFTNKCNYVNLSSLVIFVHPTSFPAKHISKDIKIEKVNIDQAISLYKRTLRTNKDLYPLDMDIILKEKLSLGTWVSYYKDEGMLDLQRKLIESDDQDNNIIANETTSSWIIFSIWNTCEAYKLQLKKSQPLRFLHATLNRAREKIFPCLRMSVSDDSLCRPFGFLFLYGIHGEGENLGELMESIWRFTSRLGENLKDCRVIVTELGFGDPLVNHIPQTASMSCIDDVWYTKRLSSHSDGKDELMRMKRQLGNVFVDPRDF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi394g00019 406 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 406 - -
Sebi394g00019 406 Pfam Acetyltransferase (GNAT) family 66 154 IPR000182 GO:0016747
Sebi394g00019 406 CDD NAT_SF 63 135 - -
Sebi394g00019 406 Gene3D - 38 165 - -
Sebi394g00019 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 149 IPR016181 -
Sebi394g00019 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 237 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi394g00019 Sebi-Chr394 222673 224707 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sebi394g00019 Acetyltransf_1 1.2e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi394g00019 - - gmx:100814448 676.781