Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi392g00031 ATGGCAGCAACATTGATGGCAGCTACAGCAAGCACTGGCACAGTTCTTAAATCAACTCCTTTCCTTGGCCAAACTAGAGGAACCAACACCAACCCTCTTAGAGATGTTGTCTCTCTTGGAGCTGGGAAATACACCATGGGAAATGAATTGTGGTATGGACCAGATAGAGTGAAATACTTAGGACCCTTTTCAGCTCAGACCCCTTCATACTTGACTGGAGAATTCCCAGGTGACTATGGATGGGACACTGCTGGGTTGTCTGCTGACCCTGAAGCATTTGCTAGGAACAGGGCTCTTGAGGTGATCCATGGACGTTGGGCTATGCTTGGAGCACTAGGCTGCATCACCCCTGAAGTGCTTGAGAAATGGGTTAGAGTGGACTTCAAAGAACCAGTTTGGTTCAAAGCTGGAGCTCAGATATTCTCAGAAGGTGGCCTTGACTACTTGGGGAACCCCAACCTTGTTCATGCACAAAGCATCCTAGCAGTGCTAGGCTTCCAAGTTGTTCTGATGGGTCTTGTTGAAGGATTCCGTATCAATGGTCTTCCTGGTGTGGGAGAGGGTAACAATCTGTACCCTGGTGGTCAGTACTTTGACCCTCTTGGTCTTGCTGATGACCCTGTCACTTTTGCTGAGCTCAAGGTTAAGGAGATCAAGAATGGTAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTCCAAGCCATTGTGACTGGAAAAGGACCACTTGAGAATCTTTTGGATCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACTAAGTTTGTGCCCGGTTCTTAA 810 0.4765 MAATLMAATASTGTVLKSTPFLGQTRGTNTNPLRDVVSLGAGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi392g00031 269 FunFam Chlorophyll a-b binding protein, chloroplastic 58 262 - -
Sebi392g00031 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Sebi392g00031 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Sebi392g00031 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Sebi392g00031 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 13 268 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi392g00031 Sebi-Chr392 395287 396532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi392g00031 14 268 Chloroplast and Mitochondria Gene Families AT2G05070 68.561 1.74e-123 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi392g00031 K08914 - cave:132175650 532.332