Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi392g00030 ATGCTATCAGCTTCGCCATGCTCGCTTACGAGAAGCTCGCTGGAAGAGATGCTTGATTCGCTTCGCCGGAAGGATGAGGAGGAAGAGAAGAAGAAAGACCTGCCGCCGGCGTTGCCGGCACGGCCGGCTTCACGGGCCCGGCTTCCTCCAGCACGGCGGTCGCTGCCGAATAACTTCAAGGTCGGTGACAGCAACGGTGGCGCAGTGGAGAATGGATTTGGTTGCAATGGAGAGAGTAAGAGGAAGGAAACAGGTTTTGGACACATGAGAAGAGGAAGCAGTTTTGGGAGCAAGAGGATGAAGAAGGATGTGGAGTGCCCTTACGTGGCAGCATTTTCAGCATCCACTGCTTCTGTGGCTTCATCAGGGATGGTTTTGGAATTGGATGGTGACAGCGTTTCTTATTTCATGAAAACGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGACAATGGGAACTAGGATCAGTACAGTCAACTTCAGGAGAGGAAGCATATGTTTCACTCTCAAATGGAAATGTTGTAAAAGTGGCCAGATCAGAGCTTGTACCAGCCAATCCTGATATTTTAGAGGGCGTGGATGATCTTATTAAAATTGGTTATTTGAATGAGCCATCGGTTCTTCACAATCTTAAGCTAAGATATTCTCAGGAGATGATTTATAGTAAAGCAGGGCCCATTTTGATTGCATTCAATCCTTTCAAAAGTCTCCAGATTTATGGAAATGATCATGTCTCCACTTATAGGCAGAGATTTATTGATAGTCCTCATGTTTATGCTATGGTAGATGCAGCTTATAACAAGATGATAAGAGATGATGTGAATCAGTCCATTATCATAAGTAAACTTCTTAACTTTGTTTATGGCCTCCTAAGATCTATGTCATTTTCCCCCTTTGGCATCTGCAATTTTCCCCAGAAAGCACTGGATACTGTTCGAATTTGTAATGAGGATCGAGAGCTGATCTTTAAGGTGCTTGCTGCAATACTATGGCTTGGAAATATATCATTCCAAGTTACTGACAGTGAAAATCATATTGAGGTTGTGGATGATGAAGCTGTAACCAATGCTGCCCTGCTGATGGGCTGCAGTTCGCGGGAATTAATGGAAGCATTATCTAGCCATAAGATCCAATCTGACAAGGATACTATTGCCAAAAGTTTGACATTGCGGCAGGCAATTGATACAAGAGATGCACTTGCAAAATTTATGTACGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAATCACTTGTGGTGGATAAAAAATGTACTGGGAAATCCATAAGTATCCTTGATATTTATGGGTTTCAGTCATTACAGAAAAATGGCTTTGAACAGTTTTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTTCATCGGCATCTGTTTAAATTGGAGCAGGAGGACTATGAATCGGATGGCATCGATTGGACTAAAGTAGATTTTGTGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAACCACTGGGTATATTCTCTTTGTTGGACGAGGAATCAGATTTACCCAAGGCTTCTGATTTAACATTTGCTAACAAACTTAAGAAACACTTGGACGCTAATCCTTGCTTCAAAGGGGAAAGAGGCAGAGCTTTTGGTGTTCGTCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATACATTGTCTTCTGATTCCATTCAACTCCTGTCGTCATGTGATTGTGAACTGCTGCAATTGTTCTCCAAAATGTTCAACCAGTCTCAGAAGCAACCAAATTCCCCTTTCCACATTGATGCACTGGATTCACAGAACCAGGGTGTTGGAACAAAATTCAAGGGTCAAGTGTTCAAGTTGATGCATCAATTGGAGAGCGCCAATCCTCACTTTATTTGCTGTATAAGGCCAAATACCAAGCAGCTTCCTGGCATTTATGACGACGACCTTGTCCTACAACAGCTCAGGTGTTGTAGAGTTCTAGAAGTTGTCAGAATCTCAAGGGCTGGATATCCTACTCGAATGACTCATCAAGAGTTTTCCAGAAGGTATGCGTTTTTGCTCTCTGAGGCCAACATATCTAAGGACCCATTGAGCATCTCAGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTATCAAGTTGGCTACACCAAACTGTATCTTCGAGCAGGGCAGATTAATGCGCTGGAGGATAAGAGAATGCAGGTTTTGCAGGGAATAATTGGGATTCAAAAATGCTTCCGTGGTCATCAAGCTCGCAGTTATTTCCATGAACTTAAGAATGGAGTTGCAACATTACAATCATTTATTCGTGGAGAAATTACGAGAAGGAAATGTGGTGTTATGATGAAGTCTTCTATAACTATTTATTCTAAAAAACTTGAGGAGATCCATGCAATCATACTACTACAATCTGTAATTCGTGGGTGGCTGGTTCGAAGGGATTCTAGTCACATGAATAAGTTGAGGAAAGATCATGAGAATGCAAAACCTAGACGGAAGTCTCGTGTAAAGTTGCCGGAATTAAAGGATTTGTCCAAAGAGCTGGTTCAGAATCTGCCTTCAGCTTTAGCAGAACTCCAAAAGCGGGTTTACAAGGCTGAAGTAATTGTAGAGCAGAAGGAAGAGGAAAATACTGAATTGAGGGAACAACTAAAACAATCTGAGAAAAAGAGGGATGAATACGAAGCAAAGATGAAATCAATGGAGGAGGCATGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTTCTGATAATGCCACTGTTCAACCTGTAAGACATGATCTTGTGTCACCTCGTGGCTATGAATCTGAAGATATGACATCCATGGGATCTCGAACACCTGGTGGAAGCACACCTATAAAGTTCTCTGGTAGTCTTTCTGTCTCTGATATAGGGAGACATGCTAATGGTACATTGACCACAGTCAGTGATTTAATGAAGGAATTTGAGCAGCGAAGACAGATCTTCGATGGTGAAGTGAGAGCTCTGAATGAGGTTAAACCAGGGCAGTCTGCTAACACAAATTCCATGGAAGAACTTCGGAAACTTAAACAGAGATTTGAGGGATGGAAGAAACAATACAAAGTTAGACTACGTGAGACAAAATCAAAGCTTCATAAATCAGGGAATTCAGAAACAGATAAAAGTCGGTGGACATGGTGGGGGAAACTAGGTTCAAGAGCATAA 3240 0.4191 MLSASPCSLTRSSLEEMLDSLRRKDEEEEKKKDLPPALPARPASRARLPPARRSLPNNFKVGDSNGGAVENGFGCNGESKRKETGFGHMRRGSSFGSKRMKKDVECPYVAAFSASTASVASSGMVLELDGDSVSYFMKTKLRVWCRQPRGQWELGSVQSTSGEEAYVSLSNGNVVKVARSELVPANPDILEGVDDLIKIGYLNEPSVLHNLKLRYSQEMIYSKAGPILIAFNPFKSLQIYGNDHVSTYRQRFIDSPHVYAMVDAAYNKMIRDDVNQSIIISKLLNFVYGLLRSMSFSPFGICNFPQKALDTVRICNEDRELIFKVLAAILWLGNISFQVTDSENHIEVVDDEAVTNAALLMGCSSRELMEALSSHKIQSDKDTIAKSLTLRQAIDTRDALAKFMYASLFDWLVEQVNKSLVVDKKCTGKSISILDIYGFQSLQKNGFEQFCINYANERLQQHFHRHLFKLEQEDYESDGIDWTKVDFVDNQECLDLFEKKPLGIFSLLDEESDLPKASDLTFANKLKKHLDANPCFKGERGRAFGVRHYAGEVLYDTNGFLEKNRDTLSSDSIQLLSSCDCELLQLFSKMFNQSQKQPNSPFHIDALDSQNQGVGTKFKGQVFKLMHQLESANPHFICCIRPNTKQLPGIYDDDLVLQQLRCCRVLEVVRISRAGYPTRMTHQEFSRRYAFLLSEANISKDPLSISVAVLQKFNIPSEMYQVGYTKLYLRAGQINALEDKRMQVLQGIIGIQKCFRGHQARSYFHELKNGVATLQSFIRGEITRRKCGVMMKSSITIYSKKLEEIHAIILLQSVIRGWLVRRDSSHMNKLRKDHENAKPRRKSRVKLPELKDLSKELVQNLPSALAELQKRVYKAEVIVEQKEEENTELREQLKQSEKKRDEYEAKMKSMEEAWQKQMASLQMSLVAARKSLASDNATVQPVRHDLVSPRGYESEDMTSMGSRTPGGSTPIKFSGSLSVSDIGRHANGTLTTVSDLMKEFEQRRQIFDGEVRALNEVKPGQSANTNSMEELRKLKQRFEGWKKQYKVRLRETKSKLHKSGNSETDKSRWTWWGKLGSRA 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi392g00030 1079 Gene3D - 675 743 - -
Sebi392g00030 1079 MobiDBLite consensus disorder prediction 1 15 - -
Sebi392g00030 1079 ProSiteProfiles IQ motif profile. 767 796 IPR000048 GO:0005515
Sebi392g00030 1079 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 138 187 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi392g00030 1079 PANTHER MYOSIN 306 1065 - -
Sebi392g00030 1079 Gene3D Kinesin motor domain 142 282 IPR036961 -
Sebi392g00030 1079 Pfam Myosin head (motor domain) 306 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi392g00030 1079 Pfam Myosin head (motor domain) 193 281 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi392g00030 1079 MobiDBLite consensus disorder prediction 16 36 - -
Sebi392g00030 1079 SMART iq_5 743 765 IPR000048 GO:0005515
Sebi392g00030 1079 SMART iq_5 766 788 IPR000048 GO:0005515
Sebi392g00030 1079 SMART iq_5 803 825 IPR000048 GO:0005515
Sebi392g00030 1079 MobiDBLite consensus disorder prediction 1 76 - -
Sebi392g00030 1079 Coils Coil 865 913 - -
Sebi392g00030 1079 Gene3D - 747 794 - -
Sebi392g00030 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 831 IPR027417 -
Sebi392g00030 1079 Coils Coil 1024 1044 - -
Sebi392g00030 1079 Gene3D Kinesin motor domain 423 671 IPR036961 -
Sebi392g00030 1079 ProSiteProfiles IQ motif profile. 746 773 IPR000048 GO:0005515
Sebi392g00030 1079 ProSiteProfiles Myosin motor domain profile. 191 742 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi392g00030 1079 SMART MYSc_2a 185 743 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi392g00030 1079 Gene3D - 440 632 - -
Sebi392g00030 1079 Pfam IQ calmodulin-binding motif 806 822 IPR000048 GO:0005515
Sebi392g00030 1079 Pfam IQ calmodulin-binding motif 748 765 IPR000048 GO:0005515
Sebi392g00030 1079 Coils Coil 11 31 - -
Sebi392g00030 1079 FunFam Unconventional myosin-XIX 442 632 - -
Sebi392g00030 1079 ProSiteProfiles IQ motif profile. 804 833 IPR000048 GO:0005515
Sebi392g00030 1079 Gene3D Myosin VI head, motor domain, U50 subdomain 315 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi392g00030 Sebi-Chr392 383840 394413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi392g00030 1 281 Myosins gene family AT5G54280 53.465 2.91e-90 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi392g00030 K10357 - gmx:100802074 1189.48