Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi392g00026 ATGCGGTGGGTTGTTCAAGTTGCACCTTTATCATTTGATTTGTTGTTTCAGTTGACAAGTTTAGATTCTGTGATTCCAGAATTTCTAAAGACTCTAGTTTGGGTAGGAGCTGAGTTTATAGGGACATTGATTCTCATATTTGCTGGGACAGCAACCGCTATTGTGAACCAAAAGACACAAGGCTCTGAGACTTTGATTGGATGTGATGCCTCTACCTATCTTGCTGTTGTGATTGTCATCCTCTCCACTGGCCACATTTCGGGTGCTCATCTTAACCCTGCAGTTGATTGA 291 0.4227 MRWVVQVAPLSFDLLFQLTSLDSVIPEFLKTLVWVGAEFIGTLILIFAGTATAIVNQKTQGSETLIGCDASTYLAVVIVILSTGHISGAHLNPAVD 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi392g00026 96 Gene3D Glycerol uptake facilitator protein. 20 96 IPR023271 -
Sebi392g00026 96 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi392g00026 96 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi392g00026 96 PANTHER AQUAPORIN NIP2-1 34 95 IPR034294 -
Sebi392g00026 96 Pfam Major intrinsic protein 35 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi392g00026 96 SUPERFAMILY Aquaporin-like 33 95 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi392g00026 Sebi-Chr392 323659 324304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi392g00026 23 95 Major Intrinsic Protein MIP AT1G80760 75.342 8.05e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi392g00026 K09874 - atr:18447007 108.227