Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi392g00023 ATGAACGAGAAGGCCAACGTTTCTAAGGAACTCAACGCCAAGCACAGAAAGATACTGGAAGGACTTCTTAAATTACCAGAGAATAAGGAATGTGCTGACTGCAAAGCTAAAGGCCCGAGATGGGCTAGTGTCAATCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAGGCCTTGGGGTACACATCTCAAAGGTAATTTGCATCTTGGTTGTTGTCATAAGTAGCACTGCTGTTCGCTCTGCTACTTTGGACACCTGGCTTCCAGAGCAGGTTGCATTCATTCAATCGATGGGAAATGAGAAGGCAAATAGTTACTGGGAAGCAGAATTACCCCCAAATTATGATAGAGTTGGAATCGAAAATTTCATCCGTGCAAAGTATGAAGAGAAGAGATGGGTTGCAAAGGATGGTAGGCCAAAATCACCTTCAAGTCTGCAAGAAGAGAAAACTCCTTCACATTGGCAAAGGCCTGTCGAAAGAGGTGGGCATAGTTATGCAACTGCATCTGAGAATACTTCTGAGGAAAGGAGGAAAATCCAACCATCAAATGCAATTCCTGCCACAAGAATTAGTGTTCCTGCTCCTCCCAAAGGACCTACGCTGGTAACTCCTGTGAAGAAACCTCAGCATATCGAGAAAGTGGAACCTGTGGTACCACAACCACAGGCTGAAACTTCACAGACTGCTAGCACAGCTCAAAATTCCACTCCAAAAGTTGACTATGCTACAGACCTTTTTGACATGTTGTCTATGGATGGTCCAAGTGAAAAGGACTCAGGGGCAGCTGATGCTACTGCCGACGATAATAACTGGGCAGCTGCTGCAGAGACATCGACAGCTGAGAAGACTGATACTGTGAAAGTGGTTGAGAGTACACCCCAGTCCACATCGGGGATTGAGGATCTATTTAAAGATTCACCTTCTGTGACACCAAGCTCAGCTCCAGAAAAACCACAAAAAGATGTTAAAAATGATATCATGAGCCTCTTTGAGAAGACCAATATGGTGTCTCCATTTGCTATGCATCAACAACAGCTAGCTATGCTGGCACAGCAACAGTCTCTTCTGATGGCTGCTGCTGCTAAATCTGCTGGTGGGGATTCCAAGCATCCCGCTAGCGTACAACAACCTGGGGCCAACATTCCTGTCCAAAGTTGGCCAGCTGCTAGTTACCAAATTCCAGGAGTAGTGCCCGTTGGTTCTCAGGGAGAATTGCAGAAACTAATGCAGACAATGAACATCACTTCAGCACATCCAGCAGGGAGCTCAGTTCAGTATCCACCATCCAGTTACTATACTATGGGGCAAGTTGCTCCAGCTAATGGTATGATGACAACGGGATCGAGTAAACCTCAGTCACCAGCTCCGGTATCATCAACCACTTCACAAACGGGAAATGATTATGATTTTTCCTCCTTAACACAAGGAATGTTTGCGAAACACTGA 1455 0.455 MNEKANVSKELNAKHRKILEGLLKLPENKECADCKAKGPRWASVNLGIFICMQCSGIHRGLGVHISKVICILVVVISSTAVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVAKDGRPKSPSSLQEEKTPSHWQRPVERGGHSYATASENTSEERRKIQPSNAIPATRISVPAPPKGPTLVTPVKKPQHIEKVEPVVPQPQAETSQTASTAQNSTPKVDYATDLFDMLSMDGPSEKDSGAADATADDNNWAAAAETSTAEKTDTVKVVESTPQSTSGIEDLFKDSPSVTPSSAPEKPQKDVKNDIMSLFEKTNMVSPFAMHQQQLAMLAQQQSLLMAAAAKSAGGDSKHPASVQQPGANIPVQSWPAASYQIPGVVPVGSQGELQKLMQTMNITSAHPAGSSVQYPPSSYYTMGQVAPANGMMTTGSSKPQSPAPVSSTTSQTGNDYDFSSLTQGMFAKH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi392g00023 484 MobiDBLite consensus disorder prediction 276 323 - -
Sebi392g00023 484 MobiDBLite consensus disorder prediction 219 241 - -
Sebi392g00023 484 MobiDBLite consensus disorder prediction 137 183 - -
Sebi392g00023 484 Pfam Putative GTPase activating protein for Arf 17 138 IPR001164 GO:0005096
Sebi392g00023 484 SUPERFAMILY ArfGap/RecO-like zinc finger 15 137 IPR037278 -
Sebi392g00023 484 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 484 IPR044520 GO:0005096
Sebi392g00023 484 SMART arf_gap_3 16 143 IPR001164 GO:0005096
Sebi392g00023 484 FunFam stromal membrane-associated protein 1 isoform X1 1 141 - -
Sebi392g00023 484 Gene3D Arf GTPase activating protein 1 142 IPR038508 -
Sebi392g00023 484 MobiDBLite consensus disorder prediction 223 241 - -
Sebi392g00023 484 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Sebi392g00023 484 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Sebi392g00023 484 PRINTS HIV Rev interacting protein signature 81 102 IPR001164 GO:0005096
Sebi392g00023 484 CDD ArfGap 19 130 - -
Sebi392g00023 484 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 143 IPR001164 GO:0005096
Sebi392g00023 484 MobiDBLite consensus disorder prediction 276 320 - -
Sebi392g00023 484 MobiDBLite consensus disorder prediction 445 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi392g00023 Sebi-Chr392 289207 294752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi392g00023 2 136 C2H2 Transcription Factor Family AT4G05330 41.259 3.75e-26 107