Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi392g00018 ATGGAGATTCAGCCGGTTTCAGAACCGGAGATTCAGCCGGTTTCAGAACCGCTTCGAGCAGTACGCGGTATATTAGCTCGTCAAAGGCAAATGCTAGAACCCTTGTACGAGGATTTTCAGCGGATTGGTGCTGGGAAATTCGGAGATGTTTTCAGGTGCAGGGACCGATTGACTCAACAAGATGTGGCCGTCAAGATTATCACTATTCCAGAAAATGAGAAAAGAAATGGACTACCATGCAGAATCATTAGAGAAGTCTCTATTCTTAAAGAGTTGGATCATATCAATGTTGTGAGGTATACATTTCTCTGA 312 0.4359 MEIQPVSEPEIQPVSEPLRAVRGILARQRQMLEPLYEDFQRIGAGKFGDVFRCRDRLTQQDVAVKIITIPENEKRNGLPCRIIREVSILKELDHINVVRYTFL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi392g00018 103 SUPERFAMILY Protein kinase-like (PK-like) 32 100 IPR011009 -
Sebi392g00018 103 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Sebi392g00018 103 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 33 100 - -
Sebi392g00018 103 Gene3D Phosphorylase Kinase; domain 1 25 102 - -
Sebi392g00018 103 Pfam Protein kinase domain 36 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi392g00018 103 ProSiteProfiles Protein kinase domain profile. 36 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi392g00018 Sebi-Chr392 205405 206091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi392g00018 36 99 Core Cell Cycle Gene Families AT3G48750 39.062 6.10e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Sebi392g00018 Pkinase 3.9e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi392g00018 K02206 - cit:107174342 70.0922