Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi392g00012 ATGGTGATGATGCTAGAATTTGCCAAGTGGACACCATTTGTTCTAGCTTTTCTTCTATACGTGGGTAAGGAATCATTTGCCTCATACACTCCCGTTGATAATTATTTAGTAGCTTGTGGTTCATCCAACAACATCAATTTTCAGGGCCGAACTTTCATTCCTGACTCTGAACATCCCAACCTTAAAATAATAGCCAACAAATCTATGACCATTACCTCAAAACTCTCTGTCCCTTCTCCACTCTATCAGTCAGCTAGACTCTTCTCAGGAAATGCATCATATCTCTTCAAAATTCAACAACATGGGATGCATTGGATCCGCCTCTATTTTCACCCTTTTCCTAACATGACCTTTGCCTCAATAACAGTAGTCACTGATCGTTTCCTTCTTCTCGATAGTTTCACTTTCAAGAACTATGATGGCTCTCACTTGTTCAAAGAGTATGCAATCAGTGTTACATCAAATGAGTTGTTTCTCAAATTCATCTCTCACCACAATTCACTTGTCTTTGTTAATGCTATCGAAGTTGTCTCTATGCCGGATGTGCTCTTCCCAGACAATCTAAAGTCATTCACCCCTTTCAGTGTACCTTTAGAATTCTTCCTTGAAACAGTTTACCGATTGAATGTGGGGGGTGAATCTATCAGTGCTGAAAATGACACCCTTAATAGGAGTTGGGAGAGTGATGAAACTTACTTTCACTCCACCAGCACTGCTATCAATATTTCAACAAACATTTCTGCTATAAAGCATCCTGATTTTTTACCAATTACAGCACCCCCTTTAGTTTATGCTACTGCTAAAGCCTTGGGAAGTGTTTTTGCTGAGTCTAATTTAAATTGGGTTTTCCATGTAAGTCCAGACTTTCTGTATTTTGTCCGGATGCATTTCTGTGACATAATTAGCAAATCTCCTAACTCTTTGGTTCTGAATCTATTTATAAATGGAAGGATTACTCTTGGAAATTTTGACCTGTCATCATTGTCTGGTGACCTTGCTGAGCCTTATTTCAAGGACTTTGTGTTCTACTCTTCAGGGGAAACTATGAGGGTAAGTGTTGGCCCAGCTTTAATGTCTAATGCAACCATGAATGGGTTGGAGATACTGAAGATAAGCAATGAACATAGTGGTTTGAATGGCTTTTCTGAAAGAGGATTTGGTAAGGTCTATAAAGGAACACTAGAAAATGGGAAAACAGTGGCTATCAAAGTAGCAAATCCTGAATCAAGACAAGGTCTCAATGAATTCCATAACGAGATAGAGTTGTTATCTTGGCTTCGTCATCAGAACCTTGTCTCTCTTGTAGGACCTCTTCTTGATAAGAGCCATGTGACAACCAATGTAAAGGGTAGTTTTGGATATGTTGATCCTGAGTATTTTAGAACCAAGTATCTCACTAAGAAATCAGATGTTTACTCTTTTGGGGTGGTGCTGATTGAAGTTATCTGTGGCAAGCCTGCTTTAGATGATGGTCGTCCAACTCAGCAAATGAATTTGGCATTGTGGGCATTAAGCTGTCATGGAAAGGGGACTTTCTATGAAATGATGGATCCATATTTGATTGGAAAAGTGAACATGGATTCTCTGAAAAAGGTCTCTGAGTTGGCTTGGAAGTGCTTGGAGGAGCGTCGGGTGAATAGGCCACCAATGGGGTATGTATTGTGTGAACTTGAAGAGGCTCTCCACCTTGAGTTGGCATCACAAGTTTTGAATAATAATGGGGACTCTGTCACTCATGCTAGTGTCGAAAATGGATTCACAGATGATATTGAAAATGTTGCTTGA 1785 0.3972 MVMMLEFAKWTPFVLAFLLYVGKESFASYTPVDNYLVACGSSNNINFQGRTFIPDSEHPNLKIIANKSMTITSKLSVPSPLYQSARLFSGNASYLFKIQQHGMHWIRLYFHPFPNMTFASITVVTDRFLLLDSFTFKNYDGSHLFKEYAISVTSNELFLKFISHHNSLVFVNAIEVVSMPDVLFPDNLKSFTPFSVPLEFFLETVYRLNVGGESISAENDTLNRSWESDETYFHSTSTAINISTNISAIKHPDFLPITAPPLVYATAKALGSVFAESNLNWVFHVSPDFLYFVRMHFCDIISKSPNSLVLNLFINGRITLGNFDLSSLSGDLAEPYFKDFVFYSSGETMRVSVGPALMSNATMNGLEILKISNEHSGLNGFSERGFGKVYKGTLENGKTVAIKVANPESRQGLNEFHNEIELLSWLRHQNLVSLVGPLLDKSHVTTNVKGSFGYVDPEYFRTKYLTKKSDVYSFGVVLIEVICGKPALDDGRPTQQMNLALWALSCHGKGTFYEMMDPYLIGKVNMDSLKKVSELAWKCLEERRVNRPPMGYVLCELEEALHLELASQVLNNNGDSVTHASVENGFTDDIENVA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi392g00012 594 Gene3D Transferase(Phosphotransferase) domain 1 442 585 - -
Sebi392g00012 594 Gene3D - 202 373 - -
Sebi392g00012 594 Gene3D - 34 179 - -
Sebi392g00012 594 Pfam Protein tyrosine and serine/threonine kinase 386 442 IPR001245 GO:0004672|GO:0006468
Sebi392g00012 594 Pfam Protein tyrosine and serine/threonine kinase 443 550 IPR001245 GO:0004672|GO:0006468
Sebi392g00012 594 SUPERFAMILY Protein kinase-like (PK-like) 385 560 IPR011009 -
Sebi392g00012 594 Pfam Malectin-like domain 38 370 IPR024788 -
Sebi392g00012 594 PANTHER OS03G0124300 PROTEIN-RELATED 13 382 IPR046957 GO:0004672
Sebi392g00012 594 Gene3D Phosphorylase Kinase; domain 1 382 441 - -
Sebi392g00012 594 FunFam Receptor-like protein kinase FERONIA 201 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi392g00012 Sebi-Chr392 149926 152181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi392g00012 411 566 Receptor kinase-like Gene Family AT2G21480 46.626 1.30e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi392g00012 Malectin_like 6.7e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi392g00012 - - zju:107429767 408.297