Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi390g00038 ATGGGTAGGTCCCCATGTTGTGATGAAGAGAGTGGTGTGAAGAAAGGGCCATGGACACCAGAAGAAGATGAGAAGCTCATTCATTATATCAATAAAAACGGCCATGGCAGTTGGAGAACACTTGCAAAGCGTGCAGGTCTCAATAGGTGTGGCAAGAGCTGCAGGCTAAGATGGTCGAAGATTGCAGCACATCTTCCAGGAAGAACTGATAATGAGATCAAGAATTTCTGGAACACTCATATAAGGAAAAAGCTTCTCAAGATGGGACTTGATCCAGAAACTCACAAGCCAAGGACTGACTTCAATCACCTCATGAATCTTTCCCAATTGCTTGGGCTTGGCATGTCATCAAACTTTGGCACTTGGGGAAACAATAACCCTCTTGGTTTACAAGCAGATATCACTCAGCTAGCCAAAATGCAACTGCTGCAAAATCTGTTGCAAATTATGAACAACAACTCATTTGTTAACATGGGTAGCCCTTACAACCTCTTGGGCAATCCCAGCCTCAACCCATTCAATGTGTTTCTCAATGGGACAAACCCCCTTCAAAACAAGGAGCCTGTGGTCTTGAGTGGTGAAGGATATGCAAACCCTGTTCTGTACTCTCAAGCACAGAGTGATGAGTCCTCACATCAGGATATGTCAAAAACATGGACAGAGGTAGAGGGTGGATCTAATCCACCACAAGATGTTGATTACAAAAAAATCATGAGCAACAGCAGTACTTCACTTGAAAATTATCAAGAAGAAAACCCACTGCCAGCATTAGTTCCATCCTCTCCAAGGACAGGAACCTTCAACCAAATGGACAGTGGCTGTAACACAGCTCAAACATCCACTCAGTCACCTTCCAACACAATCTTTGATGATTGGGAGAAGTTCCTTAACGATGACACAAGTGGTTCCTACTGGAAAGACCTTCTAGACTTGGCATCCACTTCTGCGTCACCAATTTCGTGGTAG 966 0.441 MGRSPCCDEESGVKKGPWTPEEDEKLIHYINKNGHGSWRTLAKRAGLNRCGKSCRLRWSKIAAHLPGRTDNEIKNFWNTHIRKKLLKMGLDPETHKPRTDFNHLMNLSQLLGLGMSSNFGTWGNNNPLGLQADITQLAKMQLLQNLLQIMNNNSFVNMGSPYNLLGNPSLNPFNVFLNGTNPLQNKEPVVLSGEGYANPVLYSQAQSDESSHQDMSKTWTEVEGGSNPPQDVDYKKIMSNSSTSLENYQEENPLPALVPSSPRTGTFNQMDSGCNTAQTSTQSPSNTIFDDWEKFLNDDTSGSYWKDLLDLASTSASPISW 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi390g00038 321 CDD SANT 17 81 IPR001005 -
Sebi390g00038 321 SUPERFAMILY Homeodomain-like 15 82 IPR009057 -
Sebi390g00038 321 Pfam Myb-like DNA-binding domain 15 59 IPR001005 -
Sebi390g00038 321 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 57 246 - -
Sebi390g00038 321 FunFam MYB-related transcription factor 14 62 - -
Sebi390g00038 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Sebi390g00038 321 MobiDBLite consensus disorder prediction 205 231 - -
Sebi390g00038 321 Gene3D - 59 87 - -
Sebi390g00038 321 SMART sant 14 83 IPR001005 -
Sebi390g00038 321 Gene3D - 14 58 - -
Sebi390g00038 321 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Sebi390g00038 321 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi390g00038 Sebi-Chr390 560353 561640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi390g00038 1 310 MYB Transcription Factor Family AT4G17785 38.333 8.27e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi390g00038 Myb_DNA-binding 7.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi390g00038 K09422 - gmx:100810159 444.891