Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi390g00031 ATGGCACCTTCATTCGACATTAGTAGCCACGCAGTATGTGTCATGGACGCTTCGGGCCAACTGGGCTTCAGCCTCGTCGAGAGACTCCTCCAAAGGGGCTACACAGTCCATGCCTCCCTTCAAAAATACGGGGAAGAAGAGCTATTCAATGGGATTTCTGCTGATCCCAATAAGCTCAAGATTTTTCGATCAGACCCATTTGATTACCATAGCATAATTGACGCACTCAAAGGCTGCTCTGGCTTGTTCTACACATTTGAACCTCCCCTTGACCAGCCTAATTATGATGAATACATGGCGGACGTGGAGGTAAGAGCAGCACACAACGTGCTCGAAGCTTGTGCTCAGACAGAAACAATGGATAAAGTGATTTTCACATCCTCAGCAACCGCTGTGGTTTGGAGGGAGGATCGTAAGACCATGGAACTGGATTTAGATGAGACACACTGGAGTGATGTCAATTTCTGCCGTAAATTCAAGTTATGGCATGGGATGTCAAAGACGCTGGCAGAGAAAACAGCGTGGGCCTTGGCAATGGACAGAGGAGTGAATATGGTTTCCATCAACGCAGGTTTGTTGATGGCTCATGATCTCTCCATCAAGAACCCTTACTTGAGAGGAGCTGCTGAGATGTACGAGGATGGGGTGTTTGTGACCGTTGATTTGGGCTTCTTGGTGGATGCTCACCTATGTGTCTATGAGGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAATCACATCATCAACACCCACGACGACGCCGTTCAGCTCGCGCGAAAGTTGACACCTGCTGCTCCTTCCTTACCTCAAAGCGGTGACTATGGTAAGAGTTTCATCGAGCAGAGAATAAGCAACAAGAAGTTGAACAAATTGATGGTGGACTTTGCGGCTTGA 897 0.4783 MAPSFDISSHAVCVMDASGQLGFSLVERLLQRGYTVHASLQKYGEEELFNGISADPNKLKIFRSDPFDYHSIIDALKGCSGLFYTFEPPLDQPNYDEYMADVEVRAAHNVLEACAQTETMDKVIFTSSATAVVWREDRKTMELDLDETHWSDVNFCRKFKLWHGMSKTLAEKTAWALAMDRGVNMVSINAGLLMAHDLSIKNPYLRGAAEMYEDGVFVTVDLGFLVDAHLCVYEDVSSYGRYLCFNHIINTHDDAVQLARKLTPAAPSLPQSGDYGKSFIEQRISNKKLNKLMVDFAA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi390g00031 298 Gene3D - 4 298 - -
Sebi390g00031 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 268 IPR036291 -
Sebi390g00031 298 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 289 - -
Sebi390g00031 298 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 298 - -
Sebi390g00031 298 CDD FR_SDR_e 12 294 - -
Sebi390g00031 298 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi390g00031 Sebi-Chr390 484445 487122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi390g00031 12 296 Monolignol Biosynthesis Gene Families AT5G58490 32.566 4.40e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi390g00031 - - gmx:100793329 561.607